|
|
Line 1: |
Line 1: |
− | [[Category:Reaction]] | + | [[Category:Gene]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN] == | + | == Gene Tiso_gene_9114 == |
− | * direction: | + | * right end position: |
− | ** REVERSIBLE | + | ** 2672 |
− | * ec number: | + | * transcription direction: |
− | ** [http://enzyme.expasy.org/EC/2.7.7.24 EC-2.7.7.24] | + | ** POSITIVE |
| + | * left end position: |
| + | ** 393 |
| + | * centisome position: |
| + | ** 4.0920453 |
| * Synonym(s): | | * Synonym(s): |
| | | |
− | == Reaction Formula == | + | == Reactions associated == |
− | * With identifiers: | + | * Reaction: [[ATPASE-RXN]] |
− | ** 1 [[TTP]][c] '''+''' 1 [[GLC-1-P]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[DTDP-D-GLUCOSE]][c]
| + | ** Source: [[annotation-in-silico_annotation]] |
− | * With common name(s): | + | *** Assignment: ec-number |
− | ** 1 dTTP[c] '''+''' 1 α-D-glucopyranose 1-phosphate[c] '''+''' 1 H+[c] '''<=>''' 1 diphosphate[c] '''+''' 1 dTDP-α-D-glucose[c]
| + | * Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]] |
− | | + | ** Source: [[annotation-in-silico_annotation]] |
− | == Genes associated with this reaction ==
| + | *** Assignment: ec-number |
− | Genes have been associated with this reaction based on different elements listed below.
| + | * Reaction: [[RXN-12195]] |
− | * [[Tiso_gene_14704]]
| + | ** Source: [[annotation-in-silico_annotation]] |
− | ** [[pantograph]]-[[synechocystis]] | + | *** Assignment: ec-number |
− | == Pathways ==
| + | * Reaction: [[RXN-12196]] |
− | * [[PWY-7315]], dTDP-N-acetylthomosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7315 PWY-7315] | + | ** Source: [[annotation-in-silico_annotation]] |
− | ** '''2''' reactions found over '''4''' reactions in the full pathway
| + | *** Assignment: ec-number |
− | * [[PWY-7316]], dTDP-N-acetylviosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7316 PWY-7316] | + | * Reaction: [[RXN0-5462]] |
− | ** '''2''' reactions found over '''4''' reactions in the full pathway | + | ** Source: [[annotation-in-silico_annotation]] |
− | * [[PWY-6953]], dTDP-3-acetamido-α-D-fucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6953 PWY-6953]
| + | *** Assignment: ec-number |
− | ** '''2''' reactions found over '''5''' reactions in the full pathway
| + | == Pathways associated == |
− | * [[PWY-7301]], dTDP-4-O-demethyl-β-L-noviose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7301 PWY-7301]
| + | * [[PWY-7184]] |
− | ** '''2''' reactions found over '''5''' reactions in the full pathway | + | * [[PWY-7198]] |
− | * [[PWY-7657]], dTDP-β-L-digitoxose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7657 PWY-7657] | + | * [[PWY-6545]] |
− | ** '''2''' reactions found over '''7''' reactions in the full pathway
| + | * [[PWY-7210]] |
− | * [[PWY-7318]], dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7318 PWY-7318] | + | |
− | ** '''2''' reactions found over '''5''' reactions in the full pathway | + | |
− | * [[PWY-7312]], dTDP-D-β-fucofuranose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7312 PWY-7312]
| + | |
− | ** '''2''' reactions found over '''4''' reactions in the full pathway
| + | |
− | * [[PWY-6942]], dTDP-D-desosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6942 PWY-6942]
| + | |
− | ** '''2''' reactions found over '''6''' reactions in the full pathway | + | |
− | * [[PWY-7104]], dTDP-L-megosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7104 PWY-7104] | + | |
− | ** '''2''' reactions found over '''8''' reactions in the full pathway
| + | |
− | * [[PWY-7814]], dTDP-L-daunosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7814 PWY-7814] | + | |
− | ** '''2''' reactions found over '''6''' reactions in the full pathway | + | |
− | * [[PWY-7440]], dTDP-β-L-4-epi-vancosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7440 PWY-7440]
| + | |
− | ** '''2''' reactions found over '''8''' reactions in the full pathway
| + | |
− | * [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DTDPRHAMSYN-PWY DTDPRHAMSYN-PWY]
| + | |
− | ** '''3''' reactions found over '''4''' reactions in the full pathway | + | |
− | * [[PWY-6808]], dTDP-D-forosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808] | + | |
− | ** '''2''' reactions found over '''9''' reactions in the full pathway
| + | |
− | * [[PWY-7413]], dTDP-6-deoxy-α-D-allose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7413 PWY-7413] | + | |
− | ** '''2''' reactions found over '''4''' reactions in the full pathway | + | |
− | * [[PWY-6976]], dTDP-L-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6976 PWY-6976]
| + | |
− | ** '''2''' reactions found over '''7''' reactions in the full pathway
| + | |
− | * [[PWY-7688]], dTDP-D-ravidosamine and dTDP-4-acetyl-D-ravidosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7688 PWY-7688]
| + | |
− | ** '''2''' reactions found over '''6''' reactions in the full pathway | + | |
− | * [[PWY-6974]], dTDP-L-olivose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6974 PWY-6974] | + | |
− | ** '''2''' reactions found over '''7''' reactions in the full pathway
| + | |
− | * [[PWY-6973]], dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6973 PWY-6973] | + | |
− | ** '''2''' reactions found over '''9''' reactions in the full pathway
| + | |
− | * [[PWY-3221]], dTDP-L-rhamnose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221] | + | |
− | ** '''2''' reactions found over '''3''' reactions in the full pathway
| + | |
− | * [[PWY-7414]], dTDP-α-D-mycaminose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7414 PWY-7414] | + | |
− | ** '''2''' reactions found over '''5''' reactions in the full pathway | + | |
− | == Reconstruction information ==
| + | |
− | * Category: [[orthology]]
| + | |
− | ** Source: [[orthology-synechocystis]]
| + | |
− | *** Tool: [[pantograph]]
| + | |
| == External links == | | == External links == |
− | * RHEA:
| + | {{#set: right end position=2672}} |
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15225 15225]
| + | {{#set: transcription direction=POSITIVE}} |
− | * LIGAND-RXN:
| + | {{#set: left end position=393}} |
− | ** [http://www.genome.jp/dbget-bin/www_bget?R02328 R02328]
| + | {{#set: centisome position=4.0920453 }} |
− | * UNIPROT:
| + | {{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}} |
− | ** [http://www.uniprot.org/uniprot/P55256 P55256]
| + | {{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}} |
− | ** [http://www.uniprot.org/uniprot/O27819 O27819]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q58501 Q58501]
| + | |
− | ** [http://www.uniprot.org/uniprot/P37744 P37744]
| + | |
− | ** [http://www.uniprot.org/uniprot/P72017 P72017]
| + | |
− | ** [http://www.uniprot.org/uniprot/P61887 P61887]
| + | |
− | ** [http://www.uniprot.org/uniprot/P57040 P57040]
| + | |
− | ** [http://www.uniprot.org/uniprot/P26393 P26393]
| + | |
− | ** [http://www.uniprot.org/uniprot/P55254 P55254]
| + | |
− | ** [http://www.uniprot.org/uniprot/P55257 P55257]
| + | |
− | ** [http://www.uniprot.org/uniprot/P37779 P37779]
| + | |
− | ** [http://www.uniprot.org/uniprot/P37762 P37762]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q54143 Q54143]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q56174 Q56174]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q51149 Q51149]
| + | |
− | ** [http://www.uniprot.org/uniprot/P55253 P55253]
| + | |
− | ** [http://www.uniprot.org/uniprot/O66250 O66250]
| + | |
− | ** [http://www.uniprot.org/uniprot/O08245 O08245]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9RR29 Q9RR29]
| + | |
− | {{#set: direction=REVERSIBLE}} | + | |
− | {{#set: ec number=EC-2.7.7.24}} | + | |
− | {{#set: gene associated=Tiso_gene_14704}} | + | |
− | {{#set: in pathway=PWY-7315|PWY-7316|PWY-6953|PWY-7301|PWY-7657|PWY-7318|PWY-7312|PWY-6942|PWY-7104|PWY-7814|PWY-7440|DTDPRHAMSYN-PWY|PWY-6808|PWY-7413|PWY-6976|PWY-7688|PWY-6974|PWY-6973|PWY-3221|PWY-7414}} | + | |
− | {{#set: reconstruction category=orthology}}
| + | |
− | {{#set: reconstruction source=orthology-synechocystis}}
| + | |
− | {{#set: reconstruction tool=pantograph}}
| + | |