Difference between revisions of "Tiso gene 674"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_17086 == * left end position: ** 2470 * transcription direction: ** POSITIVE * right end position: ** 3739 * centisome position: ** 62.8818...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINOL-DEHYDROGENASE-RXN RETINOL-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE * common name: *...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_17086 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINOL-DEHYDROGENASE-RXN RETINOL-DEHYDROGENASE-RXN] ==
−
* left end position:
+
* direction:
−
** 2470
+
** REVERSIBLE
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** all-trans-retinol dehydrogenase (NAD)
−
* right end position:
+
** dehydrogenase_reductase_sdr_family_member_on_chromosome_x-like
−
** 3739
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/1.1.1.105 EC-1.1.1.105]
−
** 62.881874   
+
 
* Synonym(s):
 
* Synonym(s):
 +
** all-trans retinol dehydrogenase
 +
** retinal reductase
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[RETINOL-DEHYDROGENASE-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[CPD-13524]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[RETINAL]][c] '''+''' 1 [[NADH]][c]
−
***ec-number
+
* With common name(s):
−
* [[RXN-12581]]
+
** 1 all-trans-retinol[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 all-trans-retinal[c] '''+''' 1 NADH[c]
−
** in-silico_annotation
+
 
−
***ec-number
+
== Genes associated with this reaction  ==
−
== Pathways associated ==
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[PWY-6872]]
+
* Gene: [[Tiso_gene_17086]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_18459]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=2470}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21284 21284]
−
{{#set: right end position=3739}}
+
* LIGAND-RXN:
−
{{#set: centisome position=62.881874    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02124 R02124]
−
{{#set: reaction associated=RETINOL-DEHYDROGENASE-RXN|RXN-12581}}
+
* UNIPROT:
−
{{#set: pathway associated=PWY-6872}}
+
** [http://www.uniprot.org/uniprot/P50169 P50169]
 +
** [http://www.uniprot.org/uniprot/Q64437 Q64437]
 +
** [http://www.uniprot.org/uniprot/P40394 P40394]
 +
** [http://www.uniprot.org/uniprot/P50170 P50170]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=all-trans-retinol dehydrogenase (NAD)}}
 +
{{#set: common name=dehydrogenase_reductase_sdr_family_member_on_chromosome_x-like}}
 +
{{#set: ec number=EC-1.1.1.105}}
 +
{{#set: common name=all-trans retinol dehydrogenase|retinal reductase}}
 +
{{#set: gene associated=Tiso_gene_17086|Tiso_gene_18459}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:06, 21 March 2018

Reaction RETINOL-DEHYDROGENASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • all-trans-retinol dehydrogenase (NAD)
    • dehydrogenase_reductase_sdr_family_member_on_chromosome_x-like
  • ec number:
  • Synonym(s):
    • all-trans retinol dehydrogenase
    • retinal reductase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-retinol[c] + 1 NAD+[c] <=> 1 H+[c] + 1 all-trans-retinal[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_674&oldid=38834"