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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=APIGNAR-RXN APIGNAR-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHE-tRNAs PHE-tRNAs] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** Naringenin chalcone isomerase | + | ** a tRNAphe |
| − | ** atp-dependent_rna_helicase_dhx30-like
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/5.5.1.6 EC-5.5.1.6]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** TRNA(PHE) |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | * [[PHENYLALANINE--TRNA-LIGASE-RXN]] |
| − | ** 1 [[APIGENIN]][c] '''=>''' 1 [[NARINGENIN-CMPD]][c]
| + | == Reaction(s) known to produce the compound == |
| − | * With common name(s):
| + | * [[RXN-17847]] |
| − | ** 1 2',4,4',6'-tetrahydroxychalcone[c] '''=>''' 1 (2S)-naringenin[c]
| + | * [[RXN-17848]] |
| − | | + | == Reaction(s) of unknown directionality == |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_9838]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_13414]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-7397]], naringenin biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7397 PWY-7397]
| + | |
| − | ** '''2''' reactions found over '''4''' reactions in the full pathway
| + | |
| − | * [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN] | + | |
| − | ** '''4''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | * [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787] | + | |
| − | ** '''5''' reactions found over '''10''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * LIGAND-RXN:
| + | {{#set: common name=a tRNAphe}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R02446 R02446]
| + | {{#set: common name=TRNA(PHE)}} |
| − | * UNIPROT:
| + | {{#set: consumed by=PHENYLALANINE--TRNA-LIGASE-RXN}} |
| − | ** [http://www.uniprot.org/uniprot/P11650 P11650]
| + | {{#set: produced by=RXN-17847|RXN-17848}} |
| − | ** [http://www.uniprot.org/uniprot/P11651 P11651]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41088 P41088]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P14298 P14298]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q42925 Q42925]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q42926 Q42926]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q08704 Q08704]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P28012 P28012]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41089 P41089]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O81980 O81980]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O22604 O22604]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O22651 O22651]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q43754 Q43754]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=Naringenin chalcone isomerase}} | + | |
| − | {{#set: common name=atp-dependent_rna_helicase_dhx30-like}} | + | |
| − | {{#set: ec number=EC-5.5.1.6}} | + | |
| − | {{#set: gene associated=Tiso_gene_9838|Tiso_gene_13414}}
| + | |
| − | {{#set: in pathway=PWY-7397|PWY1F-FLAVSYN|PWY-6787}}
| + | |
| − | {{#set: reconstruction category=orthology|annotation}} | + | |
| − | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
