Difference between revisions of "PWY-6689"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] == * direction: ** LEFT-...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
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** cryptochrome_photolyase_fad-binding_domain-containing_protein
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** tRNA splicing I
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.99.3 EC-4.1.99.3]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''7''' reactions in the full pathway
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** 1 [[DNA-With-Pyrimidine-Dimers]][c] '''=>''' 1 [[DNA-Adjacent-Pyrimidines]][c]
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* [[2.7.1.160-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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**
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*** [[Tiso_gene_17372]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_15524]]
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* [[3.1.27.9-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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** 3 associated gene(s):
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* [[Tiso_gene_15525]]
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*** [[Tiso_gene_3776]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_10338]]
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* [[Tiso_gene_6548]]
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*** [[Tiso_gene_5254]]
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** IN-SILICO_ANNOTATION
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_16321]]
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== Reaction(s) not found ==
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10034 RXN-10034]
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* [[Tiso_gene_15196]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12055 RXN-12055]
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17939 RXN-17939]
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* [[Tiso_gene_6547]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17940 RXN-17940]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17941 RXN-17941]
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***EC-NUMBER
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* [[Tiso_gene_6546]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
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{{#set: taxonomic range=TAX-4751}}
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* UNIPROT:
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{{#set: common name=tRNA splicing I}}
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** [http://www.uniprot.org/uniprot/P12769 P12769]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
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{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
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{{#set: completion rate=29.0}}
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** [http://www.uniprot.org/uniprot/P12768 P12768]
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** [http://www.uniprot.org/uniprot/P27526 P27526]
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** [http://www.uniprot.org/uniprot/P25078 P25078]
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** [http://www.uniprot.org/uniprot/Q43125 Q43125]
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** [http://www.uniprot.org/uniprot/P40115 P40115]
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** [http://www.uniprot.org/uniprot/Q28811 Q28811]
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** [http://www.uniprot.org/uniprot/Q24443 Q24443]
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** [http://www.uniprot.org/uniprot/Q91186 Q91186]
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** [http://www.uniprot.org/uniprot/Q42696 Q42696]
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** [http://www.uniprot.org/uniprot/P05066 P05066]
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** [http://www.uniprot.org/uniprot/O24020 O24020]
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** [http://www.uniprot.org/uniprot/O24374 O24374]
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** [http://www.uniprot.org/uniprot/P00914 P00914]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=cryptochrome_photolyase_fad-binding_domain-containing_protein}}
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{{#set: ec number=EC-4.1.99.3}}
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{{#set: gene associated=Tiso_gene_15524|Tiso_gene_15525|Tiso_gene_6548|Tiso_gene_16321|Tiso_gene_15196|Tiso_gene_6547|Tiso_gene_6546}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:09, 21 March 2018

Pathway PWY-6689

Reaction(s) found

2 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6689&oldid=39833"