Difference between revisions of "Supercoiled-Duplex-DNAs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.4.1.14-RXN 4.4.1.14-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-aminocyclopropane-1...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Supercoiled-Duplex-DNAs Supercoiled-Duplex-DNAs] == * common name: ** a supercoiled duplex DNA...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.4.1.14-RXN 4.4.1.14-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Supercoiled-Duplex-DNAs Supercoiled-Duplex-DNAs] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** 1-aminocyclopropane-1-carboxylate_synthase
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** a supercoiled duplex DNA
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* ec number:
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** [http://enzyme.expasy.org/EC/4.4.1.14 EC-4.4.1.14]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN0-4261]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[CPD-68]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-methyl-5'-thioadenosine[c] '''+''' 1 1-aminocyclopropane-1-carboxylate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_8455]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[ETHYL-PWY]], ethylene biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=ETHYL-PWY ETHYL-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7270]], L-methionine salvage cycle II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7270 PWY-7270]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=a supercoiled duplex DNA}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21747 21747]
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{{#set: consumed by=RXN0-4261}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00179 R00179]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P23279 P23279]
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** [http://www.uniprot.org/uniprot/Q06402 Q06402]
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** [http://www.uniprot.org/uniprot/Q07215 Q07215]
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** [http://www.uniprot.org/uniprot/Q42881 Q42881]
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** [http://www.uniprot.org/uniprot/Q00379 Q00379]
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** [http://www.uniprot.org/uniprot/Q06429 Q06429]
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** [http://www.uniprot.org/uniprot/Q9SB01 Q9SB01]
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** [http://www.uniprot.org/uniprot/O24062 O24062]
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** [http://www.uniprot.org/uniprot/Q9SB94 Q9SB94]
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** [http://www.uniprot.org/uniprot/Q9FUC3 Q9FUC3]
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** [http://www.uniprot.org/uniprot/Q94GA4 Q94GA4]
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** [http://www.uniprot.org/uniprot/O24217 O24217]
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** [http://www.uniprot.org/uniprot/Q9S9C5 Q9S9C5]
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** [http://www.uniprot.org/uniprot/Q43309 Q43309]
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** [http://www.uniprot.org/uniprot/P23599 P23599]
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** [http://www.uniprot.org/uniprot/Q00257 Q00257]
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** [http://www.uniprot.org/uniprot/Q43679 Q43679]
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** [http://www.uniprot.org/uniprot/Q07223 Q07223]
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** [http://www.uniprot.org/uniprot/Q7M286 Q7M286]
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** [http://www.uniprot.org/uniprot/P27486 P27486]
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** [http://www.uniprot.org/uniprot/P18485 P18485]
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** [http://www.uniprot.org/uniprot/P29535 P29535]
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** [http://www.uniprot.org/uniprot/Q41693 Q41693]
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** [http://www.uniprot.org/uniprot/Q41694 Q41694]
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** [http://www.uniprot.org/uniprot/P31531 P31531]
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** [http://www.uniprot.org/uniprot/Q43858 Q43858]
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** [http://www.uniprot.org/uniprot/Q43753 Q43753]
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** [http://www.uniprot.org/uniprot/Q43813 Q43813]
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** [http://www.uniprot.org/uniprot/Q43059 Q43059]
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** [http://www.uniprot.org/uniprot/Q43167 Q43167]
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** [http://www.uniprot.org/uniprot/Q43747 Q43747]
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** [http://www.uniprot.org/uniprot/Q43074 Q43074]
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** [http://www.uniprot.org/uniprot/Q42655 Q42655]
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** [http://www.uniprot.org/uniprot/Q42718 Q42718]
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** [http://www.uniprot.org/uniprot/Q43755 Q43755]
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** [http://www.uniprot.org/uniprot/Q43756 Q43756]
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** [http://www.uniprot.org/uniprot/Q43165 Q43165]
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** [http://www.uniprot.org/uniprot/O22464 O22464]
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** [http://www.uniprot.org/uniprot/Q43166 Q43166]
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** [http://www.uniprot.org/uniprot/Q43168 Q43168]
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** [http://www.uniprot.org/uniprot/Q37001 Q37001]
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** [http://www.uniprot.org/uniprot/Q43201 Q43201]
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** [http://www.uniprot.org/uniprot/Q43204 Q43204]
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** [http://www.uniprot.org/uniprot/O49904 O49904]
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** [http://www.uniprot.org/uniprot/Q42984 Q42984]
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** [http://www.uniprot.org/uniprot/O24220 O24220]
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** [http://www.uniprot.org/uniprot/Q07262 Q07262]
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** [http://www.uniprot.org/uniprot/O24219 O24219]
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** [http://www.uniprot.org/uniprot/P93235 P93235]
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** [http://www.uniprot.org/uniprot/Q9STR4 Q9STR4]
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** [http://www.uniprot.org/uniprot/Q9T065 Q9T065]
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** [http://www.uniprot.org/uniprot/O24609 O24609]
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** [http://www.uniprot.org/uniprot/Q42893 Q42893]
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** [http://www.uniprot.org/uniprot/Q96579 Q96579]
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** [http://www.uniprot.org/uniprot/Q96580 Q96580]
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** [http://www.uniprot.org/uniprot/P93234 P93234]
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** [http://www.uniprot.org/uniprot/O24432 O24432]
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** [http://www.uniprot.org/uniprot/O65017 O65017]
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** [http://www.uniprot.org/uniprot/O65018 O65018]
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** [http://www.uniprot.org/uniprot/Q42668 Q42668]
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** [http://www.uniprot.org/uniprot/O49819 O49819]
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** [http://www.uniprot.org/uniprot/O81957 O81957]
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** [http://www.uniprot.org/uniprot/O65159 O65159]
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** [http://www.uniprot.org/uniprot/Q41688 Q41688]
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** [http://www.uniprot.org/uniprot/O24544 O24544]
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** [http://www.uniprot.org/uniprot/Q39931 Q39931]
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** [http://www.uniprot.org/uniprot/Q9SAR0 Q9SAR0]
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** [http://www.uniprot.org/uniprot/P37821 P37821]
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** [http://www.uniprot.org/uniprot/O24061 O24061]
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** [http://www.uniprot.org/uniprot/Q9M2Y8 Q9M2Y8]
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** [http://www.uniprot.org/uniprot/Q9SMH1 Q9SMH1]
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** [http://www.uniprot.org/uniprot/Q9SEJ9 Q9SEJ9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=1-aminocyclopropane-1-carboxylate_synthase}}
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{{#set: ec number=EC-4.4.1.14}}
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{{#set: gene associated=Tiso_gene_8455}}
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{{#set: in pathway=ETHYL-PWY|PWY-7270}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:10, 21 March 2018

Metabolite Supercoiled-Duplex-DNAs

  • common name:
    • a supercoiled duplex DNA
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Supercoiled-Duplex-DNAs&oldid=39980"