|
|
| Line 1: |
Line 1: |
| − | [[Category:Gene]] | + | [[Category:Reaction]] |
| − | == Gene Tiso_gene_500 == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.6.1.41-RXN 3.6.1.41-RXN] == |
| − | * right end position: | + | * direction: |
| − | ** 16101
| + | ** LEFT-TO-RIGHT |
| − | * transcription direction:
| + | * common name: |
| − | ** POSITIVE | + | ** metallophosphatase |
| − | * left end position: | + | * ec number: |
| − | ** 15231 | + | ** [http://enzyme.expasy.org/EC/3.6.1.41 EC-3.6.1.41] |
| − | * centisome position: | + | |
| − | ** 46.732327 | + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reactions associated == | + | == Reaction Formula == |
| − | * Reaction: [[2.3.1.165-RXN]] | + | * With identifiers: |
| − | ** Source: [[annotation-in-silico_annotation]] | + | ** 1 [[ADENOSYL-P4]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 2 [[ADP]][c] |
| − | *** Assignment: ec-number
| + | * With common name(s): |
| − | * Reaction: [[3-HYDROXYDECANOYL-ACP-DEHYDR-RXN]]
| + | ** 1 5',5'''-diadenosine tetraphosphate[c] '''+''' 1 H2O[c] '''=>''' 2 H+[c] '''+''' 2 ADP[c] |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | == Genes associated with this reaction == |
| − | * Reaction: [[3-OXOACYL-ACP-REDUCT-RXN]]
| + | Genes have been associated with this reaction based on different elements listed below. |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | * Gene: [[Tiso_gene_19348]] |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[3-OXOACYL-ACP-SYNTH-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: ec-number | + | |
| − | * Reaction: [[4.2.1.58-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[4.2.1.59-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[4.2.1.61-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[ACP-S-ACETYLTRANSFER-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[ACYLCOASYN-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[ENOYL-ACP-REDUCT-NADPH-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[FATTY-ACYL-COA-SYNTHASE-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[LINOLENOYL-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[MALONYL-COA-ACP-TRANSACYL-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[R223-RXN]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-12184]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-12560]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-12978]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-13008]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-13279]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-13290]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-13614]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-16380]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-16389]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-16393]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-16401]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-16402]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-16415]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-16418]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-5901]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-7904]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9514]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9515]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9518]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9520]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9521]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9524]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9526]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9528]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9530]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9532]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9533]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9534]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9535]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9536]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9537]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9538]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9540]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9542]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9623]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9633]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9634]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9644]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9648]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9650]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9651]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9652]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9653]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9654]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9655]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-9673]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN0-7238]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN0-7239]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN0-7248]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN3O-1803]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN3O-5293]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN3O-5304]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN66-469]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN66-477]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN66-480]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN66-483]]
| + | |
| | ** Source: [[annotation-in-silico_annotation]] | | ** Source: [[annotation-in-silico_annotation]] |
| − | *** Assignment: ec-number | + | *** Assignment: EC-NUMBER |
| − | * Reaction: [[RXN66-484]] | + | * Gene: [[Tiso_gene_19347]] |
| | ** Source: [[annotation-in-silico_annotation]] | | ** Source: [[annotation-in-silico_annotation]] |
| − | *** Assignment: ec-number | + | *** Assignment: EC-NUMBER |
| − | * Reaction: [[TRANS-RXN0-623]] | + | * Gene: [[Tiso_gene_6311]] |
| | + | ** Source: [[orthology-creinhardtii]] |
| | + | == Pathways == |
| | + | == Reconstruction information == |
| | + | * Category: [[orthology]] |
| | + | ** Source: [[orthology-creinhardtii]] |
| | + | *** Tool: [[pantograph]] |
| | + | * Category: [[annotation]] |
| | ** Source: [[annotation-in-silico_annotation]] | | ** Source: [[annotation-in-silico_annotation]] |
| − | *** Assignment: ec-number | + | *** Tool: [[pathwaytools]] |
| − | == Pathways associated ==
| + | |
| − | * [[PWY-6920]]
| + | |
| − | * [[PWY-7664]]
| + | |
| − | * [[P221-PWY]]
| + | |
| − | * [[PWY-7388]]
| + | |
| − | * [[PWY-321]]
| + | |
| − | * [[PWY-5972]]
| + | |
| − | * [[PWY-5970]]
| + | |
| − | * [[PWY-5971]]
| + | |
| − | * [[PWY-7033]]
| + | |
| − | * [[PWY-5676]]
| + | |
| − | * [[PWY-5136]]
| + | |
| − | * [[PWY66-389]]
| + | |
| − | * [[PWY-7288]]
| + | |
| − | * [[PWY-4381]]
| + | |
| − | * [[PWY-7490]]
| + | |
| − | * [[PWY-6733]]
| + | |
| − | * [[PWY-7094]]
| + | |
| − | * [[PWY66-391]]
| + | |
| − | * [[PWY0-862]]
| + | |
| − | * [[PWY-5994]]
| + | |
| − | * [[PWY3O-355]]
| + | |
| − | * [[FAO-PWY]]
| + | |
| − | * [[PWY-1121]]
| + | |
| − | * [[PWY-6873]]
| + | |
| − | * [[PWY-5965]]
| + | |
| − | * [[PWY-5966]]
| + | |
| − | * [[PWY-5143]]
| + | |
| − | * [[FASYN-INITIAL-PWY]]
| + | |
| − | * [[PWY-5885]]
| + | |
| − | * [[PWY-7724]]
| + | |
| − | * [[PWY-5741]]
| + | |
| − | * [[FASYN-ELONG-PWY]]
| + | |
| − | * [[PWY-6001]]
| + | |
| − | * [[PWY-7216]]
| + | |
| − | * [[PWY-5147]]
| + | |
| − | * [[PWY-7049]]
| + | |
| − | * [[PWY-6799]]
| + | |
| − | * [[PWY-6000]]
| + | |
| − | * [[PWY66-387]]
| + | |
| − | * [[PWY-5989]]
| + | |
| − | * [[PWY1-3]]
| + | |
| − | * [[PWY-6803]]
| + | |
| − | * [[PWY66-388]]
| + | |
| | == External links == | | == External links == |
| − | {{#set: right end position=16101}} | + | * RHEA: |
| − | {{#set: transcription direction=POSITIVE}} | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24252 24252] |
| − | {{#set: left end position=15231}} | + | * LIGAND-RXN: |
| − | {{#set: centisome position=46.732327 }} | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00125 R00125] |
| − | {{#set: reaction associated=2.3.1.165-RXN|3-HYDROXYDECANOYL-ACP-DEHYDR-RXN|3-OXOACYL-ACP-REDUCT-RXN|3-OXOACYL-ACP-SYNTH-BASE-RXN|3-OXOACYL-ACP-SYNTH-RXN|4.2.1.58-RXN|4.2.1.59-RXN|4.2.1.61-RXN|ACP-S-ACETYLTRANSFER-RXN|ACYLCOASYN-RXN|ENOYL-ACP-REDUCT-NADPH-RXN|FATTY-ACYL-COA-SYNTHASE-RXN|LINOLENOYL-RXN|MALONYL-COA-ACP-TRANSACYL-RXN|PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN|R223-RXN|RXN-12184|RXN-12560|RXN-12978|RXN-13008|RXN-13279|RXN-13290|RXN-13614|RXN-16380|RXN-16389|RXN-16393|RXN-16401|RXN-16402|RXN-16415|RXN-16418|RXN-5901|RXN-7904|RXN-9514|RXN-9515|RXN-9518|RXN-9520|RXN-9521|RXN-9524|RXN-9526|RXN-9528|RXN-9530|RXN-9532|RXN-9533|RXN-9534|RXN-9535|RXN-9536|RXN-9537|RXN-9538|RXN-9540|RXN-9542|RXN-9623|RXN-9633|RXN-9634|RXN-9644|RXN-9648|RXN-9650|RXN-9651|RXN-9652|RXN-9653|RXN-9654|RXN-9655|RXN-9673|RXN0-7238|RXN0-7239|RXN0-7248|RXN3O-1803|RXN3O-5293|RXN3O-5304|RXN66-469|RXN66-477|RXN66-480|RXN66-483|RXN66-484|TRANS-RXN0-623}} | + | * UNIPROT: |
| − | {{#set: pathway associated=PWY-6920|PWY-7664|P221-PWY|PWY-7388|PWY-321|PWY-5972|PWY-5970|PWY-5971|PWY-7033|PWY-5676|PWY-5136|PWY66-389|PWY-7288|PWY-4381|PWY-7490|PWY-6733|PWY-7094|PWY66-391|PWY0-862|PWY-5994|PWY3O-355|FAO-PWY|PWY-1121|PWY-6873|PWY-5965|PWY-5966|PWY-5143|FASYN-INITIAL-PWY|PWY-5885|PWY-7724|PWY-5741|FASYN-ELONG-PWY|PWY-6001|PWY-7216|PWY-5147|PWY-7049|PWY-6799|PWY-6000|PWY66-387|PWY-5989|PWY1-3|PWY-6803|PWY66-388}} | + | ** [http://www.uniprot.org/uniprot/P05637 P05637] |
| | + | ** [http://www.uniprot.org/uniprot/P44751 P44751] |
| | + | ** [http://www.uniprot.org/uniprot/Q9JVF4 Q9JVF4] |
| | + | {{#set: direction=LEFT-TO-RIGHT}} |
| | + | {{#set: common name=metallophosphatase}} |
| | + | {{#set: ec number=EC-3.6.1.41}} |
| | + | {{#set: gene associated=Tiso_gene_19348|Tiso_gene_19347|Tiso_gene_6311}} |
| | + | {{#set: in pathway=}} |
| | + | {{#set: reconstruction category=orthology|annotation}} |
| | + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii}} |
| | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Genes have been associated with this reaction based on different elements listed below.
