Difference between revisions of "Tiso gene 9219"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY] == * taxonomic range: ** [http...")
(Created page with "Category:Gene == Gene Tiso_gene_9219 == * right end position: ** 1743 * transcription direction: ** POSITIVE * left end position: ** 143 * centisome position: ** 1.5058972...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY] ==
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== Gene Tiso_gene_9219 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** 1743
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* common name:
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* transcription direction:
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** protocatechuate degradation II (ortho-cleavage pathway)
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** POSITIVE
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* left end position:
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** 143
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* centisome position:
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** 1.5058972   
 
* Synonym(s):
 
* Synonym(s):
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** protocatechuate branch of the 3-oxoadipate pathway
 
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** protocatechuate branch of the 3-ketoadipate pathway
 
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** protocatechuate branch of the β-ketoadipate pathway
 
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** protocatechuate degradation via ortho-cleavage
 
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** protocatechuate degradation via the β-ketoadipate pathway
 
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** protocatechuate 3,4-cleavage
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''1''' reactions found over '''4''' reactions in the full pathway
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* Reaction: [[ASPARTOACYLASE-RXN]]
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* [[3-OXOADIPATE-ENOL-LACTONASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Assignment: automated-name-match
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*** [[Tiso_gene_10066]]
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* Reaction: [[RXN-13680]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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== Reaction(s) not found ==
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== Pathways associated ==
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* [http://metacyc.org/META/NEW-IMAGE?object=4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN 4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=5.5.1.2-RXN 5.5.1.2-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-34-DIOXYGENASE-RXN PROTOCATECHUATE-34-DIOXYGENASE-RXN]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: right end position=1743}}
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{{#set: common name=protocatechuate degradation II (ortho-cleavage pathway)}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=protocatechuate branch of the 3-oxoadipate pathway|protocatechuate branch of the 3-ketoadipate pathway|protocatechuate branch of the β-ketoadipate pathway|protocatechuate degradation via ortho-cleavage|protocatechuate degradation via the β-ketoadipate pathway|protocatechuate 3,4-cleavage}}
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{{#set: left end position=143}}
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{{#set: reaction found=1}}
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{{#set: centisome position=1.5058972    }}
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{{#set: total reaction=4}}
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{{#set: reaction associated=ASPARTOACYLASE-RXN|RXN-13680}}
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{{#set: completion rate=25.0}}
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Latest revision as of 19:31, 21 March 2018

Gene Tiso_gene_9219

  • right end position:
    • 1743
  • transcription direction:
    • POSITIVE
  • left end position:
    • 143
  • centisome position:
    • 1.5058972
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9219&oldid=42134"