Difference between revisions of "PWY-5835"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FUMARYLACETOACETASE-RXN FUMARYLACETOACETASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5835 PWY-5835] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FUMARYLACETOACETASE-RXN FUMARYLACETOACETASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5835 PWY-5835] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
** fumarylacetoacetate_hydrolase
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** geranyl acetate biosynthesis
** protein_fah-1
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* ec number:
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** [http://enzyme.expasy.org/EC/3.7.1.2 EC-3.7.1.2]
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* Synonym(s):
 
* Synonym(s):
 +
** geraniol interconversion
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''2''' reactions in the full pathway
** 1 [[4-FUMARYL-ACETOACETATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FUM]][c] '''+''' 1 [[3-KETOBUTYRATE]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-9192]]
* With common name(s):
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** 1 associated gene(s):
** 1 4-fumaryl-acetoacetate[c] '''+''' 1 H2O[c] '''=>''' 1 fumarate[c] '''+''' 1 acetoacetate[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_10528]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
* Gene: [[Tiso_gene_5675]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9194 RXN-9194]
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_2213]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-33090}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10244 10244]
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{{#set: common name=geranyl acetate biosynthesis}}
* LIGAND-RXN:
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{{#set: common name=geraniol interconversion}}
** [http://www.genome.jp/dbget-bin/www_bget?R01364 R01364]
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{{#set: reaction found=1}}
* UNIPROT:
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{{#set: total reaction=2}}
** [http://www.uniprot.org/uniprot/P16930 P16930]
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{{#set: completion rate=50.0}}
** [http://www.uniprot.org/uniprot/P35505 P35505]
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** [http://www.uniprot.org/uniprot/P25093 P25093]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=fumarylacetoacetate_hydrolase}}
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{{#set: common name=protein_fah-1}}
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{{#set: ec number=EC-3.7.1.2}}
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{{#set: gene associated=Tiso_gene_5675|Tiso_gene_2213}}
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{{#set: in pathway=TYRFUMCAT-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:39, 21 March 2018

Pathway PWY-5835

  • taxonomic range:
  • common name:
    • geranyl acetate biosynthesis
  • Synonym(s):
    • geraniol interconversion

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links