Difference between revisions of "Tiso gene 16631"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-9780 RXN3O-9780] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/E...")
 
(Created page with "Category:Gene == Gene Tiso_gene_16631 == * right end position: ** 2444 * transcription direction: ** POSITIVE * left end position: ** 355 * centisome position: ** 8.384506...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-9780 RXN3O-9780] ==
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== Gene Tiso_gene_16631 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2444
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
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** POSITIVE
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* left end position:
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** 355
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* centisome position:
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** 8.384506   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACYLCOADEHYDROG-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[Palmitoyl-ACPs]][c] '''=>''' 1 [[PALMITYL-COA]][c] '''+''' 1 [[ACP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 coenzyme A[c] '''+''' 1 a palmitoyl-[acp][c] '''=>''' 1 palmitoyl-CoA[c] '''+''' 1 a holo-[acyl-carrier protein][c]
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* Reaction: [[LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-11734]]
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* [[PWY-7746]], mycobacterial sulfolipid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7746 PWY-7746]
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** Source: [[annotation-in-silico_annotation]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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*** Assignment: ec-number
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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* Reaction: [[RXN-13451]]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* [[gap-filling]]:
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* Reaction: [[RXN-13615]]
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** [[meneco]]:
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** Source: [[annotation-in-silico_annotation]]
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*** [[added for gapfilling]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14131]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14229]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14262]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14278]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16540]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16557]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17775]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17779]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17783]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17784]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17788]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17792]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17796]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-7094]]
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* [[PWY-7654]]
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* [[FAO-PWY]]
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* [[PWY-7656]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2444}}
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{{#set: ec number=EC-2.3.1}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: in pathway=PWY-7746|PWY-5994}}
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{{#set: left end position=355}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: centisome position=8.384506    }}
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{{#set: reconstruction tool=meneco}}
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{{#set: reaction associated=ACYLCOADEHYDROG-RXN|LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN|RXN-11734|RXN-13451|RXN-13615|RXN-14131|RXN-14229|RXN-14262|RXN-14278|RXN-16540|RXN-16557|RXN-17775|RXN-17779|RXN-17783|RXN-17784|RXN-17788|RXN-17792|RXN-17796}}
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{{#set: reconstruction source=added for gapfilling}}
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{{#set: pathway associated=PWY-7094|PWY-7654|FAO-PWY|PWY-7656}}

Latest revision as of 20:43, 21 March 2018

Gene Tiso_gene_16631

  • right end position:
    • 2444
  • transcription direction:
    • POSITIVE
  • left end position:
    • 355
  • centisome position:
    • 8.384506
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16631&oldid=43429"