Difference between revisions of "Tiso gene 15687"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEME-OXYGENASE-DECYCLIZING-RXN HEME-OXYGENASE-DECYCLIZING-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
(Created page with "Category:Gene == Gene Tiso_gene_15687 == * right end position: ** 4355 * transcription direction: ** POSITIVE * left end position: ** 1916 * centisome position: ** 39.3025...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEME-OXYGENASE-DECYCLIZING-RXN HEME-OXYGENASE-DECYCLIZING-RXN] ==
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== Gene Tiso_gene_15687 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4355
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.14.14.18 EC-1.14.14.18]
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** 1916
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* centisome position:
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** 39.302563   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PGLYCDEHYDROG-RXN]]
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** 3 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''=>''' 3 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[FE+2]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 3 [[WATER]][c] '''+''' 1 [[BILIVERDINE]][c]
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* With common name(s):
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** 3 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 ferroheme b[c] '''+''' 2 H+[c] '''+''' 3 oxygen[c] '''=>''' 3 an oxidized [NADPH-hemoprotein reductase][c] '''+''' 1 Fe2+[c] '''+''' 1 carbon monoxide[c] '''+''' 3 H2O[c] '''+''' 1 biliverdin-IX-α[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_19364]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5874]], heme degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5874 PWY-5874]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[RXN0-300]]
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** Source: [[orthology-synechocystis]]
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== Pathways associated ==
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* [[SERSYN-PWY]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=4355}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00311 R00311]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: left end position=1916}}
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** [http://www.uniprot.org/uniprot/P23711 P23711]
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{{#set: centisome position=39.302563    }}
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** [http://www.uniprot.org/uniprot/P14901 P14901]
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{{#set: reaction associated=PGLYCDEHYDROG-RXN|RXN0-300}}
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** [http://www.uniprot.org/uniprot/P30519 P30519]
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{{#set: pathway associated=SERSYN-PWY}}
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** [http://www.uniprot.org/uniprot/P06762 P06762]
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** [http://www.uniprot.org/uniprot/P09601 P09601]
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** [http://www.uniprot.org/uniprot/Q7M338 Q7M338]
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** [http://www.uniprot.org/uniprot/P14791 P14791]
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** [http://www.uniprot.org/uniprot/P32394 P32394]
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** [http://www.uniprot.org/uniprot/P72849 P72849]
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** [http://www.uniprot.org/uniprot/P74133 P74133]
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** [http://www.uniprot.org/uniprot/Q9RKR1 Q9RKR1]
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** [http://www.uniprot.org/uniprot/O48782 O48782]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.14.14.18}}
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{{#set: gene associated=Tiso_gene_19364}}
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{{#set: in pathway=PWY-5874}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:55, 21 March 2018

Gene Tiso_gene_15687

  • right end position:
    • 4355
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1916
  • centisome position:
    • 39.302563
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15687&oldid=44665"