Difference between revisions of "2.8.1.6-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_9428 == * Synonym(s): == Reactions associated == * RXN-1224 ** pantograph-esiliculosus * RXN-15117 ** pantograph-ath...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.1.6-RXN 2.8.1.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** biotin_synthase * ec nu...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_9428 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.1.6-RXN 2.8.1.6-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
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* common name:
 +
** biotin_synthase
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* ec number:
 +
** [http://enzyme.expasy.org/EC/2.8.1.6 EC-2.8.1.6]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-1224]]
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* With identifiers:
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** [[pantograph]]-[[esiliculosus]]
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** 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[DETHIOBIOTIN]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''=>''' 1 [[BIOTIN]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c]
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* [[RXN-15117]]
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* With common name(s):
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** [[pantograph]]-[[athaliana]]
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** 2 S-adenosyl-L-methionine[c] '''+''' 1 dethiobiotin[c] '''+''' 1 a sulfurated [sulfur carrier][c] '''+''' 2 a reduced [2Fe-2S] ferredoxin[c] '''=>''' 1 biotin[c] '''+''' 2 L-methionine[c] '''+''' 2 5'-deoxyadenosine[c] '''+''' 1 an unsulfurated [sulfur carrier][c] '''+''' 2 an oxidized [2Fe-2S] ferredoxin[c]
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== Pathways associated ==
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* [[PWY-7817]]
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== Genes associated with this reaction  ==
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* [[PWYQT-4427]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_10345]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=RXN-1224|RXN-15117}}
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* RHEA:
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{{#set: pathway associated=PWY-7817|PWYQT-4427}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22060 22060]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01078 R01078]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9JRW7 Q9JRW7]
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** [http://www.uniprot.org/uniprot/Q9PLZ3 Q9PLZ3]
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** [http://www.uniprot.org/uniprot/P53557 P53557]
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** [http://www.uniprot.org/uniprot/O67104 O67104]
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** [http://www.uniprot.org/uniprot/P44987 P44987]
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** [http://www.uniprot.org/uniprot/Q58692 Q58692]
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** [http://www.uniprot.org/uniprot/P0A506 P0A506]
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** [http://www.uniprot.org/uniprot/Q9Z6L5 Q9Z6L5]
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** [http://www.uniprot.org/uniprot/Q9JUE3 Q9JUE3]
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** [http://www.uniprot.org/uniprot/P46396 P46396]
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** [http://www.uniprot.org/uniprot/Q47862 Q47862]
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** [http://www.uniprot.org/uniprot/P19206 P19206]
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** [http://www.uniprot.org/uniprot/P32451 P32451]
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** [http://www.uniprot.org/uniprot/P54967 P54967]
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** [http://www.uniprot.org/uniprot/P46715 P46715]
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** [http://www.uniprot.org/uniprot/P73538 P73538]
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** [http://www.uniprot.org/uniprot/P12996 P12996]
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** [http://www.uniprot.org/uniprot/O59778 O59778]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=biotin_synthase}}
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{{#set: ec number=EC-2.8.1.6}}
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{{#set: gene associated=Tiso_gene_10345}}
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{{#set: in pathway=PWY0-1507|PWY-7380}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:57, 21 March 2018

Reaction 2.8.1.6-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • biotin_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I: PWY0-1507
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7380, biotin biosynthesis from 8-amino-7-oxononanoate II: PWY-7380
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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