Difference between revisions of "3.2.1.55-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13698 RXN-13698] == * direction: ** REVERSIBLE * common name: ** alanine_aminotransferase_mitoc...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.55-RXN 3.2.1.55-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** acetyl-_carbox...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13698 RXN-13698] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.55-RXN 3.2.1.55-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** alanine_aminotransferase_mitochondrial
+
** ORF
−
** alanine_aminotransferase
+
** acetyl-_carboxylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.2 EC-2.6.1.2]
+
** [http://enzyme.expasy.org/EC/3.2.1.55 EC-3.2.1.55]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PYRUVATE]][c]
+
** n [[WATER]][c] '''+''' 1 [[1-5-L-Arabinooligosaccharides]][c] '''=>''' n [[CPD-12045]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-oxoglutarate[c] '''+''' 1 L-alanine[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 pyruvate[c]
+
** n H2O[c] '''+''' 1 a (1->5)-&alpha;-L-arabinan oligosaccharide[c] '''=>''' n &alpha;-L-arabinofuranose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10957]]
+
* Gene: [[Tiso_gene_10897]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_6300]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_5959]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_14849]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
** EXPERIMENTAL_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_6299]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 
−
** '''7''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pathwaytools]]:
+
*** Tool: [[pathwaytools]]
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* UNIPROT:
−
{{#set: common name=alanine_aminotransferase_mitochondrial}}
+
** [http://www.uniprot.org/uniprot/P82594 P82594]
−
{{#set: common name=alanine_aminotransferase}}
+
** [http://www.uniprot.org/uniprot/Q9KBQ8 Q9KBQ8]
−
{{#set: ec number=EC-2.6.1.2}}
+
** [http://www.uniprot.org/uniprot/P42255 P42255]
−
{{#set: gene associated=Tiso_gene_10957|Tiso_gene_5959}}
+
** [http://www.uniprot.org/uniprot/P53627 P53627]
−
{{#set: in pathway=PWY-7117|PWY-7115}}
+
** [http://www.uniprot.org/uniprot/P49943 P49943]
−
{{#set: reconstruction category=orthology}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: common name=ORF}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: common name=acetyl-_carboxylase}}
 +
{{#set: ec number=EC-3.2.1.55}}
 +
{{#set: gene associated=Tiso_gene_10897|Tiso_gene_6300|Tiso_gene_14849|Tiso_gene_6299}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 21:00, 21 March 2018

Reaction 3.2.1.55-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • acetyl-_carboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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