Difference between revisions of "Tiso gene 17237"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** g...")
(Created page with "Category:Gene == Gene Tiso_gene_17237 == * right end position: ** 3684 * transcription direction: ** POSITIVE * left end position: ** 74 * centisome position: ** 1.92859...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] ==
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== Gene Tiso_gene_17237 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3684
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* common name:
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* transcription direction:
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** glutamate-5-semialdehyde_dehydrogenase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.2.1.41 EC-1.2.1.41]
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** 74
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* centisome position:
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** 1.92859   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[NADPH-DEHYDROGENASE-FLAVIN-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[L-GLUTAMATE-5-P]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NADP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NADPH[c] '''+''' 1 γ-L-glutamyl 5-phosphate[c] '''+''' 1 H+[c] '''=>''' 1 phosphate[c] '''+''' 1 L-glutamate-5-semialdehyde[c] '''+''' 1 NADP+[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-12445]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_16258]]
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** Source: [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_16634]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3684}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19541 19541]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=74}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03313 R03313]
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{{#set: centisome position=1.92859    }}
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* UNIPROT:
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{{#set: reaction associated=NADPH-DEHYDROGENASE-FLAVIN-RXN|RXN-12445}}
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** [http://www.uniprot.org/uniprot/Q9JUK8 Q9JUK8]
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** [http://www.uniprot.org/uniprot/P45121 P45121]
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** [http://www.uniprot.org/uniprot/P53000 P53000]
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** [http://www.uniprot.org/uniprot/P07004 P07004]
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** [http://www.uniprot.org/uniprot/P17857 P17857]
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** [http://www.uniprot.org/uniprot/P45638 P45638]
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** [http://www.uniprot.org/uniprot/P54885 P54885]
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** [http://www.uniprot.org/uniprot/O04226 O04226]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutamate-5-semialdehyde_dehydrogenase}}
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{{#set: ec number=EC-1.2.1.41}}
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{{#set: gene associated=Tiso_gene_16258|Tiso_gene_16634}}
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{{#set: in pathway=PWY-6922|PROSYN-PWY|ARGININE-SYN4-PWY|PWY-3341|CITRULBIO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:09, 21 March 2018

Gene Tiso_gene_17237

  • right end position:
    • 3684
  • transcription direction:
    • POSITIVE
  • left end position:
    • 74
  • centisome position:
    • 1.92859
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17237&oldid=46460"