Difference between revisions of "Tiso gene 18752"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLTRANSFER-RXN N-ACETYLTRANSFER-RXN] == * direction: ** REVERSIBLE * common name: ** n-acetyl...")
 
(Created page with "Category:Gene == Gene Tiso_gene_18752 == * right end position: ** 2753 * transcription direction: ** NEGATIVE * left end position: ** 415 * centisome position: ** 14.73721...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLTRANSFER-RXN N-ACETYLTRANSFER-RXN] ==
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== Gene Tiso_gene_18752 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 2753
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* common name:
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* transcription direction:
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** n-acetylglutamate_synthase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.3.1.1 EC-2.3.1.1]
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** 415
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* centisome position:
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** 14.737216   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-15556]]
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** 1 [[ACETYL-COA]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[ACETYL-GLU]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 acetyl-CoA[c] '''+''' 1 L-glutamate[c] '''<=>''' 1 coenzyme A[c] '''+''' 1 N-acetyl-L-glutamate[c] '''+''' 1 H+[c]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_5365]]
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* [[PWY-7511]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_11663]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[GLUTORN-PWY]], L-ornithine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTORN-PWY GLUTORN-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2753}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24292 24292]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=415}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00259 R00259]
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{{#set: centisome position=14.737216    }}
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* UNIPROT:
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JW21 Q9JW21]
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{{#set: pathway associated=PWY-7511}}
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** [http://www.uniprot.org/uniprot/P63574 P63574]
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** [http://www.uniprot.org/uniprot/Q12643 Q12643]
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** [http://www.uniprot.org/uniprot/P0A6C5 P0A6C5]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=n-acetylglutamate_synthase}}
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{{#set: ec number=EC-2.3.1.1}}
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{{#set: gene associated=Tiso_gene_5365|Tiso_gene_11663}}
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{{#set: in pathway=PWY-5154|GLUTORN-PWY|ARGSYNBSUB-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:10, 21 March 2018

Gene Tiso_gene_18752

  • right end position:
    • 2753
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 415
  • centisome position:
    • 14.737216
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18752&oldid=46563"