Difference between revisions of "Tiso gene 12321"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4261 RXN0-4261] == * direction: ** LEFT-TO-RIGHT * common name: ** atp-dependent_dna_helicase...")
(Created page with "Category:Gene == Gene Tiso_gene_12321 == * right end position: ** 1964 * transcription direction: ** POSITIVE * left end position: ** 227 * centisome position: ** 3.178381...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4261 RXN0-4261] ==
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== Gene Tiso_gene_12321 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1964
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* common name:
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* transcription direction:
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** atp-dependent_dna_helicase
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** POSITIVE
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** helicase
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* left end position:
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** rep_helicase
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** 227
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* centisome position:
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** 3.1783814   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GAMMA-GLUTAMYLTRANSFERASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[Supercoiled-Duplex-DNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Single-Stranded-DNAs]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 H2O[c] '''+''' 1 a supercoiled duplex DNA[c] '''+''' 1 ATP[c] '''=>''' 1 a single stranded DNA[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-18092]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: automated-name-match
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* [[Tiso_gene_13200]]
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* Reaction: [[RXN-6601]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: automated-name-match
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* [[Tiso_gene_7552]]
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** Source: [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN-9157]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_14204]]
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*** Assignment: automated-name-match
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN66-336]]
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* [[Tiso_gene_14419]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* [[Tiso_gene_5713]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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* [[PWY-4041]]
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***AUTOMATED-NAME-MATCH
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* [[PWY-5826]]
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* [[Tiso_gene_3462]]
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* [[PWY66-375]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7553]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14019]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14420]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9320]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_395]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1964}}
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{{#set: common name=atp-dependent_dna_helicase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=helicase}}
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{{#set: left end position=227}}
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{{#set: common name=rep_helicase}}
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{{#set: centisome position=3.1783814    }}
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{{#set: gene associated=Tiso_gene_13200|Tiso_gene_7552|Tiso_gene_14204|Tiso_gene_14419|Tiso_gene_5713|Tiso_gene_3462|Tiso_gene_7553|Tiso_gene_14019|Tiso_gene_14420|Tiso_gene_9320|Tiso_gene_395}}
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{{#set: reaction associated=GAMMA-GLUTAMYLTRANSFERASE-RXN|RXN-18092|RXN-6601|RXN-9157|RXN66-336}}
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{{#set: in pathway=}}
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{{#set: pathway associated=PWY-4041|PWY-5826|PWY66-375}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:11, 21 March 2018

Gene Tiso_gene_12321

  • right end position:
    • 1964
  • transcription direction:
    • POSITIVE
  • left end position:
    • 227
  • centisome position:
    • 3.1783814
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12321&oldid=46710"