Difference between revisions of "Tiso gene 3581"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=KDO-LIPID-IVA KDO-LIPID-IVA] == * smiles: ** CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O...")
(Created page with "Category:Gene == Gene Tiso_gene_3581 == * right end position: ** 13315 * transcription direction: ** NEGATIVE * left end position: ** 3134 * centisome position: ** 16.5601...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=KDO-LIPID-IVA KDO-LIPID-IVA] ==
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== Gene Tiso_gene_3581 ==
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* smiles:
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* right end position:
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** CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O)C(OC(CC(O)CCCCCCCCCCC)=O)1)COC2(C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(C(O2)COC3(C([O-])=O)(O[CH](C(CO)O)C(O)C(O)C3))OP([O-])([O-])=O))
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** 13315
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* inchi key:
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* transcription direction:
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** InChIKey=GPNCBCJEDRRCDW-XFULRARUSA-I
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** NEGATIVE
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* common name:
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* left end position:
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** α-Kdo-(2→6)-lipid IVA
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** 3134
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* molecular weight:
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* centisome position:
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** 1620.861    
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** 16.560106    
 
* Synonym(s):
 
* Synonym(s):
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** 3-Deoxy-D-manno-octulosonyl-lipid IV(A)
 
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** 3-deoxy-α-D-manno-oct-2-ulopyranosyl-(2->6)-2-deoxy-2-{[(3R)-3-hydroxypentadecanoyl]amino}-3-O-[(3R)-3-hydroxytetradecanoyl]-4-O-phosphono-β-D-glucopyranosyl-(1->6)-2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-1-O-phosphono-α-D-glucopyranose
 
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** (KDO)-lipid IVA
 
  
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== Reaction(s) known to consume the compound ==
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== Reactions associated ==
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* [[KDOTRANS2-RXN]]
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* Reaction: [[ADENOSINETRIPHOSPHATASE-RXN]]
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== Reaction(s) known to produce the compound ==
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** Source: [[orthology-esiliculosus]]
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* [[KDOTRANS-RXN]]
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* Reaction: [[ATPASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[TCX8]]
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** Source: [[orthology-athaliana]]
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: right end position=13315}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91820572 91820572]
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{{#set: transcription direction=NEGATIVE}}
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* CHEBI:
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{{#set: left end position=3134}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=60364 60364]
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{{#set: centisome position=16.560106   }}
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* BIGG : kdolipid4
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{{#set: reaction associated=ADENOSINETRIPHOSPHATASE-RXN|ATPASE-RXN|TCX8}}
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* LIGAND-CPD:
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** [http://www.genome.jp/dbget-bin/www_bget?C06024 C06024]
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{{#set: smiles=CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O)C(OC(CC(O)CCCCCCCCCCC)=O)1)COC2(C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(C(O2)COC3(C([O-])=O)(O[CH](C(CO)O)C(O)C(O)C3))OP([O-])([O-])=O))}}
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{{#set: inchi key=InChIKey=GPNCBCJEDRRCDW-XFULRARUSA-I}}
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{{#set: common name=α-Kdo-(2→6)-lipid IVA}}
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{{#set: molecular weight=1620.861   }}
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{{#set: common name=3-Deoxy-D-manno-octulosonyl-lipid IV(A)|3-deoxy-α-D-manno-oct-2-ulopyranosyl-(2->6)-2-deoxy-2-{[(3R)-3-hydroxypentadecanoyl]amino}-3-O-[(3R)-3-hydroxytetradecanoyl]-4-O-phosphono-β-D-glucopyranosyl-(1->6)-2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-1-O-phosphono-α-D-glucopyranose|(KDO)-lipid IVA}}
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{{#set: consumed by=KDOTRANS2-RXN}}
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{{#set: produced by=KDOTRANS-RXN}}
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Latest revision as of 20:13, 21 March 2018

Gene Tiso_gene_3581

  • right end position:
    • 13315
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3134
  • centisome position:
    • 16.560106
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3581&oldid=46901"