Difference between revisions of "6.3.2.25-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.7-RXN 2.6.1.7-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tubulin-tyrosine_liga...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.7-RXN 2.6.1.7-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** tubulin-tyrosine_ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.7 EC-2.6.1.7]
+
** [http://enzyme.expasy.org/EC/6.3.2.25 EC-6.3.2.25]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-14736]][c] '''<=>''' 1 [[CPD-476]][c] '''+''' 1 [[GLT]][c]
+
** 1 [[Detyrosinated-alpha--tubulins]][c] '''+''' 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Alpha-tubulins]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-oxoglutarate[c] '''+''' 1 L-kynurenine[c] '''<=>''' 1 4-(2-aminophenyl)-2,4-dioxobutanoate[c] '''+''' 1 L-glutamate[c]
+
** 1 detyrosinated &alpha;-tubulin[c] '''+''' 1 L-tyrosine[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 &alpha;-tubulin[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15680]]
+
* Gene: [[Tiso_gene_9268]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17589]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17234]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15094]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_5828]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_20330]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15093]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_10440]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14575]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10591]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_3379]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4516]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17450]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
 
−
** '''9''' reactions found over '''17''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20964 20964]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01956 R01956]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04730 R04730]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q16773 Q16773]
+
** [http://www.uniprot.org/uniprot/P38160 P38160]
−
** [http://www.uniprot.org/uniprot/P47039 P47039]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/Q08415 Q08415]
+
{{#set: common name=tubulin-tyrosine_ligase}}
−
** [http://www.uniprot.org/uniprot/Q9XX97 Q9XX97]
+
{{#set: ec number=EC-6.3.2.25}}
−
** [http://www.uniprot.org/uniprot/Q8MP09 Q8MP09]
+
{{#set: gene associated=Tiso_gene_9268|Tiso_gene_17589|Tiso_gene_17234|Tiso_gene_15094|Tiso_gene_5828|Tiso_gene_20330|Tiso_gene_15093|Tiso_gene_10440|Tiso_gene_14575|Tiso_gene_10591|Tiso_gene_3379|Tiso_gene_4516|Tiso_gene_17450}}
−
** [http://www.uniprot.org/uniprot/O14209 O14209]
+
{{#set: in pathway=}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: ec number=EC-2.6.1.7}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: gene associated=Tiso_gene_15680}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: in pathway=PWY-6309}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 20:18, 21 March 2018

Reaction 6.3.2.25-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • tubulin-tyrosine_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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