Difference between revisions of "Tiso gene 11923"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.39-RXN 2.5.1.39-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Gene == Gene Tiso_gene_11923 == * right end position: ** 4803 * transcription direction: ** NEGATIVE * left end position: ** 28 * centisome position: ** 0.3775111...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.39-RXN 2.5.1.39-RXN] ==
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== Gene Tiso_gene_11923 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4803
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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** NEGATIVE
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* left end position:
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** 28
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* centisome position:
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** 0.3775111   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[SOLANESYL-PYROPHOSPHATE]][c] '''+''' 1 [[4-hydroxybenzoate]][c] '''=>''' 1 [[NONAPRENYL-4-HYDROXYBENZOATE]][c] '''+''' 1 [[PPI]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 all-trans-nonaprenyl diphosphate[c] '''+''' 1 4-hydroxybenzoate[c] '''=>''' 1 3-nonaprenyl-4-hydroxybenzoate[c] '''+''' 1 diphosphate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_11582]]
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** [[pantograph]]-[[synechocystis]]
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== Pathways  ==
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* [[PWY-5871]], ubiquinol-9 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5871 PWY-5871]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5856]], ubiquinol-9 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5856 PWY-5856]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6978]], plastoquinol-9 biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6978 PWY-6978]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=4803}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17709 17709]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=28}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07273 R07273]
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{{#set: centisome position=0.3775111    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ATPASE-RXN}}
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{{#set: ec number=EC-2.5.1.39}}
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{{#set: gene associated=Tiso_gene_11582}}
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{{#set: in pathway=PWY-5871|PWY-5856|PWY-6978}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:24, 21 March 2018

Gene Tiso_gene_11923

  • right end position:
    • 4803
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 28
  • centisome position:
    • 0.3775111
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11923&oldid=48492"