Difference between revisions of "PWY-6689"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1884 RXN-1884] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1884 RXN-1884] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
** [http://enzyme.expasy.org/EC/1.1.1.316 EC-1.1.1.316]
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* common name:
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** tRNA splicing I
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''7''' reactions in the full pathway
** 1 [[NAD]][c] '''+''' 1 [[L-Galactopyranose]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-330]][c]
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* [[2.7.1.160-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 NAD+[c] '''+''' 1 L-galactopyranose[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 L-galactono-1,4-lactone[c]
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*** [[Tiso_gene_17372]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
Genes have been associated with this reaction based on different elements listed below.
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* [[3.1.27.9-RXN]]
* [[Tiso_gene_703]]
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** 3 associated gene(s):
** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_3776]]
* [[Tiso_gene_14920]]
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*** [[Tiso_gene_10338]]
** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_5254]]
* [[Tiso_gene_4219]]
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** 1 reconstruction source(s) associated:
** [[pantograph]]-[[athaliana]]
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*** [[annotation-in-silico_annotation]]
* [[Tiso_gene_18748]]
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== Reaction(s) not found ==
** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10034 RXN-10034]
* [[Tiso_gene_14624]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12055 RXN-12055]
** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17939 RXN-17939]
== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17940 RXN-17940]
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17941 RXN-17941]
** '''6''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-33090}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31562 31562]
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{{#set: taxonomic range=TAX-4751}}
* LIGAND-RXN:
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{{#set: common name=tRNA splicing I}}
** [http://www.genome.jp/dbget-bin/www_bget?R07675 R07675]
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{{#set: reaction found=2}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=7}}
{{#set: ec number=EC-1.1.1.316}}
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{{#set: completion rate=29.0}}
{{#set: gene associated=Tiso_gene_703|Tiso_gene_14920|Tiso_gene_4219|Tiso_gene_18748|Tiso_gene_14624}}
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{{#set: in pathway=PWY-882}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Latest revision as of 19:09, 21 March 2018

Pathway PWY-6689

Reaction(s) found

2 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links