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| − | [[Category:Reaction]] | + | [[Category:Pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-AMINOTRANSFERASE-RXN ALANINE-AMINOTRANSFERASE-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834] == |
| − | * direction: | + | * taxonomic range: |
| − | ** REVERSIBLE | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157] |
| | * common name: | | * common name: |
| − | ** alanine_aminotransferase_mitochondrial | + | ** spermidine biosynthesis III |
| − | ** alanine_aminotransferase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/2.6.1.2 EC-2.6.1.2]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) found == |
| − | * With identifiers:
| + | '''1''' reactions found over '''4''' reactions in the full pathway |
| − | ** 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PYRUVATE]][c]
| + | * [[SAMDECARB-RXN]] |
| − | * With common name(s): | + | ** 2 associated gene(s): |
| − | ** 1 L-alanine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 pyruvate[c] | + | *** [[Tiso_gene_4269]] |
| − | | + | *** [[Tiso_gene_11030]] |
| − | == Genes associated with this reaction ==
| + | ** 3 reconstruction source(s) associated: |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | *** [[orthology-athaliana]] |
| − | * [[Tiso_gene_10957]] | + | *** [[annotation-in-silico_annotation]] |
| − | ** IN-SILICO_ANNOTATION | + | *** [[orthology-esiliculosus]] |
| − | ***EC-NUMBER
| + | == Reaction(s) not found == |
| − | ** EXPERIMENTAL_ANNOTATION
| + | * [http://metacyc.org/META/NEW-IMAGE?object=ARGDECARBOX-RXN ARGDECARBOX-RXN] |
| − | ***EC-NUMBER
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-12514 RXN-12514] |
| − | * [[Tiso_gene_5959]] | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-12515 RXN-12515] |
| − | ** IN-SILICO_ANNOTATION | + | |
| − | ***EC-NUMBER | + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[athaliana]] | + | |
| − | ** [[pantograph]]-[[athaliana]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | == Pathways == | + | |
| − | * [[ALANINE-DEG3-PWY]], L-alanine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-DEG3-PWY ALANINE-DEG3-PWY]
| + | |
| − | ** '''1''' reactions found over '''1''' reactions in the full pathway
| + | |
| − | * [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7383 PWY-7383]
| + | |
| − | ** '''5''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
| + | |
| − | ** '''7''' reactions found over '''10''' reactions in the full pathway | + | |
| − | * [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate): [http://metacyc.org/META/NEW-IMAGE?object=ALACAT2-PWY ALACAT2-PWY]
| + | |
| − | ** '''2''' reactions found over '''3''' reactions in the full pathway | + | |
| − | * [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
| + | |
| − | ** '''7''' reactions found over '''9''' reactions in the full pathway | + | |
| − | * [[ALANINE-SYN2-PWY]], L-alanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-SYN2-PWY ALANINE-SYN2-PWY]
| + | |
| − | ** '''1''' reactions found over '''1''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[athaliana]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: taxonomic range=TAX-2}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19453 19453]
| + | {{#set: taxonomic range=TAX-2157}} |
| − | * LIGAND-RXN:
| + | {{#set: common name=spermidine biosynthesis III}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00258 R00258]
| + | {{#set: reaction found=1}} |
| − | * UNIPROT:
| + | {{#set: total reaction=4}} |
| − | ** [http://www.uniprot.org/uniprot/P13191 P13191]
| + | {{#set: completion rate=25.0}} |
| − | ** [http://www.uniprot.org/uniprot/P25409 P25409]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P24298 P24298]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9UR81 Q9UR81]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P34106 P34106]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P52894 P52894]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q42685 Q42685]
| + | |
| − | {{#set: direction=REVERSIBLE}} | + | |
| − | {{#set: common name=alanine_aminotransferase_mitochondrial}} | + | |
| − | {{#set: common name=alanine_aminotransferase}} | + | |
| − | {{#set: ec number=EC-2.6.1.2}} | + | |
| − | {{#set: gene associated=Tiso_gene_10957|Tiso_gene_5959}} | + | |
| − | {{#set: in pathway=ALANINE-DEG3-PWY|PWY-7383|PWY-7117|ALACAT2-PWY|PWY-7115|ALANINE-SYN2-PWY}} | + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=athaliana|esiliculosus}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
