Difference between revisions of "RXN-14271"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14271 RXN-14271] == * direction: ** LEFT-TO-RIGHT * common name: ** (S)-3-hydroxypalmitoyl-CoA...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14271 RXN-14271] == * direction: ** LEFT-TO-RIGHT * common name: ** (S)-3-hydroxypalmitoyl-CoA...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[NAD]][c] '''+''' 1 [[CPD0-2232]][c] '''=>''' 1 [[ | + | ** 1 [[NAD]][c] '''+''' 1 [[CPD0-2232]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-OXOPALMITOYL-COA]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 NAD+[c] '''+''' 1 (S)-3-hydroxyhexadecanoyl-CoA[c] '''=>''' 1 | + | ** 1 NAD+[c] '''+''' 1 (S)-3-hydroxyhexadecanoyl-CoA[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 3-oxo-palmitoyl-CoA[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[Tiso_gene_5857]] | + | * Gene: [[Tiso_gene_5857]] |
| − | ** [[ | + | ** Source: [[orthology-athaliana]] |
| − | ** [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | ** [[ | + | ** Source: [[orthology-creinhardtii]] |
| − | ** [[ | + | ** Source: [[orthology-creinhardtii]] |
| − | * [[Tiso_gene_14262]] | + | * Gene: [[Tiso_gene_14262]] |
| − | ** | + | ** Source: [[annotation-experimental_annotation]] |
| − | ***AUTOMATED-NAME-MATCH | + | *** Assignment: AUTOMATED-NAME-MATCH |
== Pathways == | == Pathways == | ||
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654] | * [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654] | ||
| Line 31: | Line 31: | ||
** '''6''' reactions found over '''22''' reactions in the full pathway | ** '''6''' reactions found over '''22''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]] | + | ** Source: [[orthology-athaliana]] |
| − | ** | + | *** Tool: [[pantograph]] |
| − | *** [[esiliculosus]] | + | ** Source: [[orthology-creinhardtii]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| − | * [[annotation]] | + | ** Source: [[orthology-esiliculosus]] |
| − | ** [[ | + | *** Tool: [[pantograph]] |
| − | *** [[ | + | * Category: [[annotation]] |
| − | ** | + | ** Source: [[annotation-experimental_annotation]] |
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| Line 50: | Line 53: | ||
{{#set: gene associated=Tiso_gene_5857|Tiso_gene_14262}} | {{#set: gene associated=Tiso_gene_5857|Tiso_gene_14262}} | ||
{{#set: in pathway=PWY-7654|PWY-7656}} | {{#set: in pathway=PWY-7654|PWY-7656}} | ||
| − | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=orthology|annotation}} |
| − | + | {{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|annotation-in-silico_annotation|orthology-athaliana|orthology-esiliculosus}} | |
| − | {{#set: reconstruction source=creinhardtii| | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
| − | + | ||
| − | {{#set: reconstruction tool=pathwaytools | + | |
| − | + | ||
Latest revision as of 19:24, 21 March 2018
Contents
Reaction RXN-14271
- direction:
- LEFT-TO-RIGHT
- common name:
- (S)-3-hydroxypalmitoyl-CoA oxidoreductase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 NAD[c] + 1 CPD0-2232[c] => 1 NADH[c] + 1 PROTON[c] + 1 3-OXOPALMITOYL-COA[c]
- With common name(s):
- 1 NAD+[c] + 1 (S)-3-hydroxyhexadecanoyl-CoA[c] => 1 NADH[c] + 1 H+[c] + 1 3-oxo-palmitoyl-CoA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_5857
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
- Source: orthology-creinhardtii
- Gene: Tiso_gene_14262
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
Pathways
- PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis: PWY-7654
- 6 reactions found over 11 reactions in the full pathway
- PWY-7656, Spodoptera littoralis pheromone biosynthesis: PWY-7656
- 6 reactions found over 22 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
