Difference between revisions of "RXN-8675"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6642 RXN-6642] == * direction: ** LEFT-TO-RIGHT * common name: ** aminopeptidase_n ** membrane_...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8675 RXN-8675] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** uroporphyrinogen methyltransfe...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6642 RXN-6642] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8675 RXN-8675] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** aminopeptidase_n
 
−
** membrane_aminopeptidase_i
 
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/3.4.11.2 EC-3.4.11.2]
 
 
* Synonym(s):
 
* Synonym(s):
 +
** uroporphyrinogen methyltransferase
 +
** uroporphyrinogen-III methyltransferase
 +
** adenosylmethionine-uroporphyrinogen III methyltransferase
 +
** S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase
 +
** SirA
 +
** CysG
 +
** uroporphyrin-III C-methyltransferase (incorrect)
 +
** S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-6262]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[S-Substituted-L-Cysteines]][c]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-9038]][c] '''=>''' 1 [[DIHYDROSIROHYDROCHLORIN]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [Cys-Gly]-S-conjugate[c] '''+''' 1 H2O[c] '''=>''' 1 glycine[c] '''+''' 1 an L-cysteine-S-conjugate[c]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 precorrin-1[c] '''=>''' 1 precorrin-2[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16906]]
+
* Gene: [[Tiso_gene_8614]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_860]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6842]], glutathione-mediated detoxification II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6842 PWY-6842]
+
* [[PWY-7376]], cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7376 PWY-7376]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-4061]], glutathione-mediated detoxification I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4061 PWY-4061]
+
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7377 PWY-7377]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5194]], siroheme biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5194 PWY-5194]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5196]], factor 430 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5196 PWY-5196]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21972 21972]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07238 R07238]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=aminopeptidase_n}}
+
{{#set: common name=uroporphyrinogen methyltransferase|uroporphyrinogen-III methyltransferase|adenosylmethionine-uroporphyrinogen III methyltransferase|S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase|SirA|CysG|uroporphyrin-III C-methyltransferase (incorrect)|S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)}}
−
{{#set: common name=membrane_aminopeptidase_i}}
+
{{#set: gene associated=Tiso_gene_8614}}
−
{{#set: ec number=EC-3.4.11.2}}
+
{{#set: in pathway=PWY-7376|PWY-7377|PWY-5194|PWY-5196}}
−
{{#set: gene associated=Tiso_gene_16906|Tiso_gene_860}}
+
−
{{#set: in pathway=PWY-6842|PWY-4061}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 19:34, 21 March 2018

Reaction RXN-8675

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):
    • uroporphyrinogen methyltransferase
    • uroporphyrinogen-III methyltransferase
    • adenosylmethionine-uroporphyrinogen III methyltransferase
    • S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase
    • SirA
    • CysG
    • uroporphyrin-III C-methyltransferase (incorrect)
    • S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7376, cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation): PWY-7376
    • 2 reactions found over 13 reactions in the full pathway
  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): PWY-7377
    • 3 reactions found over 15 reactions in the full pathway
  • PWY-5194, siroheme biosynthesis: PWY-5194
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5196, factor 430 biosynthesis: PWY-5196
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8675&oldid=42488"