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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIB5PISOM-RXN RIB5PISOM-RXN] == | + | == Gene Tiso_gene_14722 == |
| − | * direction: | + | * right end position: |
| − | ** REVERSIBLE | + | ** 2768 |
| − | * common name: | + | * transcription direction: |
| − | ** ORF | + | ** POSITIVE |
| − | * ec number: | + | * left end position: |
| − | ** [http://enzyme.expasy.org/EC/5.3.1.6 EC-5.3.1.6] | + | ** 1291 |
| | + | * centisome position: |
| | + | ** 23.614414 |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * Reaction: [[RXN-7683]] |
| − | ** 1 [[RIBOSE-5P]][c] '''<=>''' 1 [[RIBULOSE-5P]][c]
| + | ** Source: [[annotation-in-silico_annotation]] |
| − | * With common name(s):
| + | *** Assignment: automated-name-match |
| − | ** 1 D-ribose 5-phosphate[c] '''<=>''' 1 D-ribulose 5-phosphate[c]
| + | == Pathways associated == |
| − | | + | * [[PWY-5107]] |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_18217]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
| + | |
| − | ** '''11''' reactions found over '''15''' reactions in the full pathway
| + | |
| − | * [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
| + | |
| − | ** '''13''' reactions found over '''13''' reactions in the full pathway | + | |
| − | * [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
| + | |
| − | ** '''10''' reactions found over '''10''' reactions in the full pathway
| + | |
| − | * [[PWY-1861]], formaldehyde assimilation II (RuMP Cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861]
| + | |
| − | ** '''7''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
| + | |
| − | ** '''11''' reactions found over '''12''' reactions in the full pathway | + | |
| − | * [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch): [http://metacyc.org/META/NEW-IMAGE?object=NONOXIPENT-PWY NONOXIPENT-PWY] | + | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]: | + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[synechocystis]]
| + | |
| − | *** [[athaliana]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: right end position=2768}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14657 14657]
| + | {{#set: transcription direction=POSITIVE}} |
| − | * LIGAND-RXN:
| + | {{#set: left end position=1291}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01056 R01056]
| + | {{#set: centisome position=23.614414 }} |
| − | * UNIPROT:
| + | {{#set: reaction associated=RXN-7683}} |
| − | ** [http://www.uniprot.org/uniprot/P0A7Z0 P0A7Z0]
| + | {{#set: pathway associated=PWY-5107}} |
| − | ** [http://www.uniprot.org/uniprot/Q9CDI7 Q9CDI7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P44725 P44725]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q58998 Q58998]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JTM5 Q9JTM5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PP08 Q9PP08]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P37351 P37351]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P74234 P74234]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q55766 Q55766]
| + | |
| − | {{#set: direction=REVERSIBLE}} | + | |
| − | {{#set: common name=ORF}} | + | |
| − | {{#set: ec number=EC-5.3.1.6}} | + | |
| − | {{#set: gene associated=Tiso_gene_18217}} | + | |
| − | {{#set: in pathway=P124-PWY|CALVIN-PWY|PWY-5723|PWY-1861|P185-PWY|NONOXIPENT-PWY}} | + | |
| − | {{#set: reconstruction category=orthology}} | + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=in-silico_annotation}}
| + | |
