Difference between revisions of "PWY0-1535"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-O-ACETTRAN-RXN SERINE-O-ACETTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ser...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1535 PWY0-1535] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-O-ACETTRAN-RXN SERINE-O-ACETTRAN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1535 PWY0-1535] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** serine_o-acetyltransferase
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** D-serine degradation
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** serine_acetyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.30 EC-2.3.1.30]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
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** 1 [[ACETYL-COA]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[ACETYLSERINE]][c]
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* [[RXN-15124]]
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* With common name(s):
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** 0 associated gene:
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** 1 acetyl-CoA[c] '''+''' 1 L-serine[c] '''=>''' 1 coenzyme A[c] '''+''' 1 O-acetyl-L-serine[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-15127]]
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* [[Tiso_gene_10634]]
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** 0 associated gene:
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** IN-SILICO_ANNOTATION
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** 2 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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** [[pantograph]]-[[athaliana]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[synechocystis]]
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== Reaction(s) not found ==
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15581 RXN-15581]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_7066]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_4492]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[CYSTSYN-PWY]], L-cysteine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=CYSTSYN-PWY CYSTSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7274]], D-cycloserine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7274 PWY-7274]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6936]], seleno-amino acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24560 24560]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-1535 PWY0-1535]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00586 R00586]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=D-serine degradation}}
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** [http://www.uniprot.org/uniprot/Q39533 Q39533]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/Q06750 Q06750]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P71405 P71405]
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{{#set: completion rate=67.0}}
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** [http://www.uniprot.org/uniprot/Q9JR86 Q9JR86]
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** [http://www.uniprot.org/uniprot/Q9PPF6 Q9PPF6]
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** [http://www.uniprot.org/uniprot/P23145 P23145]
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** [http://www.uniprot.org/uniprot/Q9CEI8 Q9CEI8]
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** [http://www.uniprot.org/uniprot/P43886 P43886]
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** [http://www.uniprot.org/uniprot/P32003 P32003]
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** [http://www.uniprot.org/uniprot/P29847 P29847]
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** [http://www.uniprot.org/uniprot/Q42588 Q42588]
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** [http://www.uniprot.org/uniprot/Q39218 Q39218]
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** [http://www.uniprot.org/uniprot/Q42538 Q42538]
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** [http://www.uniprot.org/uniprot/P74089 P74089]
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** [http://www.uniprot.org/uniprot/Q8W2B8 Q8W2B8]
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** [http://www.uniprot.org/uniprot/Q8S895 Q8S895]
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** [http://www.uniprot.org/uniprot/P93544 P93544]
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** [http://www.uniprot.org/uniprot/O69218 O69218]
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** [http://www.uniprot.org/uniprot/O32979 O32979]
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** [http://www.uniprot.org/uniprot/P0A9D4 P0A9D4]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=serine_o-acetyltransferase}}
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{{#set: common name=serine_acetyltransferase}}
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{{#set: ec number=EC-2.3.1.30}}
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{{#set: gene associated=Tiso_gene_10634|Tiso_gene_7066|Tiso_gene_4492}}
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{{#set: in pathway=CYSTSYN-PWY|PWY-7274|PWY-6936}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:49, 21 March 2018

Pathway PWY0-1535

  • taxonomic range:
  • common name:
    • D-serine degradation
  • Synonym(s):

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY0-1535&oldid=44032"