Difference between revisions of "RXN-13037"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7860 CPD-7860] == * smiles: ** CC(=CC=CC=C(C=CC=C(C=CC1(C(CC(C(C=1C)=O)O)(C)C))C)C)C=CC=C(C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13037 RXN-13037] == * direction: ** LEFT-TO-RIGHT * common name: ** octanoyl:GcvH transferase *...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7860 CPD-7860] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13037 RXN-13037] ==
−
* smiles:
+
* direction:
−
** CC(=CC=CC=C(C=CC=C(C=CC1(C(CC(C(C=1C)=O)O)(C)C))C)C)C=CC=C(C)C=CC2(=C(CCCC2(C)C)C)
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=DFNMSBYEEKBETA-GVVOHZSFSA-N
+
 
* common name:
 
* common name:
−
** 3-hydroxyechinenone
+
** octanoyl:GcvH transferase
−
* molecular weight:
+
** lipoate-protein_ligase
−
** 566.865   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.181 EC-2.3.1.181]
 
* Synonym(s):
 
* Synonym(s):
−
** 3-hydroxy-4-keto-β,β-carotene
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[R07562]]
+
** 1 [[Gcv-H]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[Octanoylated-Gcv-H]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 [glycine cleavage system lipoyl-carrier protein]-L-lysine[c] '''+''' 1 an octanoyl-[acp][c] '''=>''' 1 H+[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a [glycine-cleavage complex H protein] N6-octanoyl-L-lysine[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_4494]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_4493]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-6987]], lipoate biosynthesis and incorporation III (Bacillus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6987 PWY-6987]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7382]], lipoate biosynthesis and incorporation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7382 PWY-7382]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=10120578 10120578]
+
{{#set: common name=octanoyl:GcvH transferase}}
−
* CHEMSPIDER:
+
{{#set: common name=lipoate-protein_ligase}}
−
** [http://www.chemspider.com/Chemical-Structure.8296099.html 8296099]
+
{{#set: ec number=EC-2.3.1.181}}
−
* LIGAND-CPD:
+
{{#set: gene associated=Tiso_gene_4494|Tiso_gene_4493}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C15966 C15966]
+
{{#set: in pathway=PWY-6987|PWY-7382}}
−
{{#set: smiles=CC(=CC=CC=C(C=CC=C(C=CC1(C(CC(C(C=1C)=O)O)(C)C))C)C)C=CC=C(C)C=CC2(=C(CCCC2(C)C)C)}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: inchi key=InChIKey=DFNMSBYEEKBETA-GVVOHZSFSA-N}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: common name=3-hydroxyechinenone}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: molecular weight=566.865    }}
+
−
{{#set: common name=3-hydroxy-4-keto-β,β-carotene}}
+
−
{{#set: produced by=R07562}}
+

Latest revision as of 19:50, 21 March 2018

Reaction RXN-13037

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • octanoyl:GcvH transferase
    • lipoate-protein_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 [glycine cleavage system lipoyl-carrier protein]-L-lysine[c] + 1 an octanoyl-[acp][c] => 1 H+[c] + 1 a holo-[acyl-carrier protein][c] + 1 a [glycine-cleavage complex H protein] N6-octanoyl-L-lysine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6987, lipoate biosynthesis and incorporation III (Bacillus): PWY-6987
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7382, lipoate biosynthesis and incorporation (yeast): PWY-7382
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13037&oldid=44097"