Difference between revisions of "OrDCh"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-901 RXN0-901] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.17....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=orDCh orDCh] == * direction: ** LEFT-TO-RIGHT * common name: ** ornithine decarboxylase, chloroplas...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-901 RXN0-901] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=orDCh orDCh] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/1.17.1.4 EC-1.17.1.4]
+
** ornithine decarboxylase, chloroplast
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[XANTHINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[URATE]][c] '''+''' 1 [[PROTON]][c]
+
** 1.0 [[L-ORNITHINE]][h] '''+''' 1.0 [[PROTON]][h] '''=>''' 1.0 [[PUTRESCINE]][h] '''+''' 1.0 [[CARBON-DIOXIDE]][h]
 
* With common name(s):
 
* With common name(s):
−
** 1 xanthine[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 urate[c] '''+''' 1 H+[c]
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** 1.0 L-ornithine[h] '''+''' 1.0 H+[h] '''=>''' 1.0 putrescine[h] '''+''' 1.0 CO2[h]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11775]]
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* Gene: [[Tiso_gene_10737]]
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** [[pantograph]]-[[athaliana]]
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** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
 
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** '''7''' reactions found over '''24''' reactions in the full pathway
 
−
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
 
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** '''4''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6607]], guanosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6607 PWY-6607]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6999]], theophylline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6999 PWY-6999]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6608]], guanosine nucleotides degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6608 PWY-6608]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6538]], caffeine degradation III (bacteria, via demethylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
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** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
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*** [[athaliana]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16669 16669]
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{{#set: common name=ornithine decarboxylase, chloroplast}}
−
* LIGAND-RXN:
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{{#set: gene associated=Tiso_gene_10737}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02103 R02103]
+
{{#set: in pathway=}}
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q62637 Q62637]
+
−
** [http://www.uniprot.org/uniprot/P22811 P22811]
+
−
** [http://www.uniprot.org/uniprot/Q12553 Q12553]
+
−
** [http://www.uniprot.org/uniprot/P08793 P08793]
+
−
** [http://www.uniprot.org/uniprot/P10351 P10351]
+
−
** [http://www.uniprot.org/uniprot/Q7M0I7 Q7M0I7]
+
−
** [http://www.uniprot.org/uniprot/Q7M0I8 Q7M0I8]
+
−
** [http://www.uniprot.org/uniprot/Q7M0I9 Q7M0I9]
+
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** [http://www.uniprot.org/uniprot/P47990 P47990]
+
−
** [http://www.uniprot.org/uniprot/P47989 P47989]
+
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** [http://www.uniprot.org/uniprot/Q00519 Q00519]
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−
{{#set: direction=REVERSIBLE}}
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−
{{#set: ec number=EC-1.17.1.4}}
+
−
{{#set: gene associated=Tiso_gene_11775}}
+
−
{{#set: in pathway=PWY-5497|SALVADEHYPOX-PWY|P164-PWY|PWY-6596|PWY-6607|PWY-6606|PWY-6999|PWY-6608|PWY-5695|PWY-6538}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=athaliana}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:16, 21 March 2018

Reaction orDCh

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ornithine decarboxylase, chloroplast
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=OrDCh&oldid=47419"