Difference between revisions of "RXN-12581"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN] == * direction: ** LEFT-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12581 RXN-12581] == * direction: ** LEFT-TO-RIGHT * common name: ** dehydrogenase_reductase_sdr...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12581 RXN-12581] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** sphinganine1-phosphate_aldolase
+
** dehydrogenase_reductase_sdr_family_member_on_chromosome_x-like
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.2.27 EC-4.1.2.27]
+
** [http://enzyme.expasy.org/EC/1.1.1.105 EC-1.1.1.105]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-649]][c] '''=>''' 1 [[PHOSPHORYL-ETHANOLAMINE]][c] '''+''' 1 [[PALMITALDEHYDE]][c]
+
** 1 [[CRPB-all-trans-Retinol]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CRPB-all-trans-Retinal]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 sphinganine 1-phosphate[c] '''=>''' 1 O-phosphoethanolamine[c] '''+''' 1 palmitaldehyde[c]
+
** 1 an all-trans retinol-[cellular-retinol-binding-protein][c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 an all-trans retinal-[cellular-retinol-binding-protein][c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_105]]
+
* Gene: [[Tiso_gene_17086]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
+
* [[PWY-6872]], retinoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6872 PWY-6872]
−
** '''5''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[athaliana]]
+
*** Tool: [[pathwaytools]]
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18594 18594]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02464 R02464]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=sphinganine1-phosphate_aldolase}}
+
{{#set: common name=dehydrogenase_reductase_sdr_family_member_on_chromosome_x-like}}
−
{{#set: ec number=EC-4.1.2.27}}
+
{{#set: ec number=EC-1.1.1.105}}
−
{{#set: gene associated=Tiso_gene_105}}
+
{{#set: gene associated=Tiso_gene_17086}}
−
{{#set: in pathway=PWY-7119}}
+
{{#set: in pathway=PWY-6872}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:19, 21 March 2018

Reaction RXN-12581

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dehydrogenase_reductase_sdr_family_member_on_chromosome_x-like
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an all-trans retinol-[cellular-retinol-binding-protein][c] + 1 NAD+[c] => 1 NADH[c] + 1 an all-trans retinal-[cellular-retinol-binding-protein][c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6872, retinoate biosynthesis I: PWY-6872
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12581&oldid=47815"