Difference between revisions of "RXN-17775"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9536 RXN-9536] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-meristoyl-[acyl-carrier...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17775 RXN-17775] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-_dehydrogenase ** Acyl...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9536 RXN-9536] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17775 RXN-17775] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-oxo-meristoyl-[acyl-carrier protein] reductase
+
** acyl-_dehydrogenase
−
** polyketide_synthase
+
** Acyl-CoA dehydrogenase
−
** 3-oxoacyl-(acyl-carrier-protein)
+
** acyl-CoA_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-oxo-myristoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxymyristoyl-ACPs]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[OLEOYL-COA]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[CPD-19172]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 3-oxo-myristoyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxymyristoyl-[acp][c]
+
** 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 oleoyl-CoA[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 (2E,9Z)-octadecenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10876]]
+
* Gene: [[Tiso_gene_8271]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_136]]
+
* Gene: [[Tiso_gene_6475]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_16579]]
+
* Gene: [[Tiso_gene_16113]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_9885]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_8272]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_10415]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[synechocystis]]
+
* Gene: [[Tiso_gene_16631]]
−
* [[Tiso_gene_135]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: AUTOMATED-NAME-MATCH
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_5449]]
−
* [[Tiso_gene_500]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: AUTOMATED-NAME-MATCH
−
***EC-NUMBER
+
−
* [[Tiso_gene_624]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_13394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13083]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[synechocystis]]
+
*** Tool: [[pathwaytools]]
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-oxo-meristoyl-[acyl-carrier protein] reductase}}
+
{{#set: common name=acyl-_dehydrogenase}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: common name=Acyl-CoA dehydrogenase}}
−
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
+
{{#set: common name=acyl-CoA_dehydrogenase}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: ec number=EC-1.3.8}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: gene associated=Tiso_gene_8271|Tiso_gene_6475|Tiso_gene_16113|Tiso_gene_8272|Tiso_gene_16631|Tiso_gene_5449}}
−
{{#set: ec number=EC-1.1.1.100}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Tiso_gene_10876|Tiso_gene_136|Tiso_gene_16579|Tiso_gene_9885|Tiso_gene_10415|Tiso_gene_135|Tiso_gene_500|Tiso_gene_624|Tiso_gene_13394|Tiso_gene_13083}}
+
−
{{#set: in pathway=PWY-5971|PWY-5994}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis|esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 20:20, 21 March 2018

Reaction RXN-17775

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-_dehydrogenase
    • Acyl-CoA dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 an oxidized electron-transfer flavoprotein[c] + 1 oleoyl-CoA[c] => 1 a reduced electron-transfer flavoprotein[c] + 1 (2E,9Z)-octadecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17775&oldid=47928"