Difference between revisions of "Tiso gene 5365"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9557 RXN-9557] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxy-cis-vaccenoyl-[acyl...")
(Created page with "Category:Gene == Gene Tiso_gene_5365 == * right end position: ** 3112 * transcription direction: ** NEGATIVE * left end position: ** 90 * centisome position: ** 0.6637657...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9557 RXN-9557] ==
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== Gene Tiso_gene_5365 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3112
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* common name:
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* transcription direction:
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** 3-hydroxy-cis-vaccenoyl-[acyl-carrier protein] dehydratase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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** 90
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* centisome position:
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** 0.6637657   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLUTAMATE-N-ACETYLTRANSFERASE-RXN]]
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** 1 [[R-3-hydroxy-cis-vaccenoyl-ACPs]][c] '''=>''' 1 [[cis-vaccen-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 (R)-3-hydroxy-cis-vacc-11-enoyl-[acp][c] '''=>''' 1 a (2-trans-11-cis)-vaccen-2-enoyl-[acp][c] '''+''' 1 H2O[c]
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* Reaction: [[N-ACETYLTRANSFER-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN0-6948]]
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* [[Tiso_gene_6884]]
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** Source: [[annotation-in-silico_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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== Pathways associated ==
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== Pathways  ==
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* [[PWY-5154]]
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* [[PWY-5973]], cis-vaccenate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5973 PWY-5973]
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* [[GLUTORN-PWY]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]]
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3112}}
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{{#set: common name=3-hydroxy-cis-vaccenoyl-[acyl-carrier protein] dehydratase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: left end position=90}}
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{{#set: gene associated=Tiso_gene_6884}}
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{{#set: centisome position=0.6637657    }}
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{{#set: in pathway=PWY-5973}}
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{{#set: reaction associated=GLUTAMATE-N-ACETYLTRANSFERASE-RXN|N-ACETYLTRANSFER-RXN|RXN0-6948}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-5154|GLUTORN-PWY|ARGSYNBSUB-PWY}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:21, 21 March 2018

Gene Tiso_gene_5365

  • right end position:
    • 3112
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 90
  • centisome position:
    • 0.6637657
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5365&oldid=48041"