Difference between revisions of "RXN0-6479"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLPHOSPHATASE-RXN ACYLPHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acylpho...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6479 RXN0-6479] == * direction: ** LEFT-TO-RIGHT * common name: ** exosome_complex_exonuclease...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLPHOSPHATASE-RXN ACYLPHOSPHATASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6479 RXN0-6479] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acylphosphatase
+
** exosome_complex_exonuclease
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.1.7 EC-3.6.1.7]
+
** [http://enzyme.expasy.org/EC/3.1.13.1 EC-3.1.13.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Acyl-Phosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Carboxylates]][c] '''+''' 1 [[Pi]][c]
+
** n [[WATER]][c] '''+''' 1 [[CPD0-2351]][c] '''=>''' n [[Nucleoside-Monophosphates]][c] '''+''' 1 [[CPD0-2352]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an acyl phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 a carboxylate[c] '''+''' 1 phosphate[c]
+
** n H2O[c] '''+''' 1 a tRNA precursor with a 5' extension and a long 3' trailer[c] '''=>''' n a nucleoside 5'-monophosphate[c] '''+''' 1 a tRNA precursor with a 5' extension and a short 3' extension[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13909]]
+
* Gene: [[Tiso_gene_11612]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_11613]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14965 14965]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00539 R00539]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P14620 P14620]
 
−
** [http://www.uniprot.org/uniprot/P35745 P35745]
 
−
** [http://www.uniprot.org/uniprot/P41500 P41500]
 
−
** [http://www.uniprot.org/uniprot/Q9CHW2 Q9CHW2]
 
−
** [http://www.uniprot.org/uniprot/P0AB65 P0AB65]
 
−
** [http://www.uniprot.org/uniprot/P07033 P07033]
 
−
** [http://www.uniprot.org/uniprot/P07031 P07031]
 
−
** [http://www.uniprot.org/uniprot/P07032 P07032]
 
−
** [http://www.uniprot.org/uniprot/P35744 P35744]
 
−
** [http://www.uniprot.org/uniprot/P00818 P00818]
 
−
** [http://www.uniprot.org/uniprot/P07311 P07311]
 
−
** [http://www.uniprot.org/uniprot/P00819 P00819]
 
−
** [http://www.uniprot.org/uniprot/P00820 P00820]
 
−
** [http://www.uniprot.org/uniprot/P00821 P00821]
 
−
** [http://www.uniprot.org/uniprot/P14621 P14621]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acylphosphatase}}
+
{{#set: common name=exosome_complex_exonuclease}}
−
{{#set: ec number=EC-3.6.1.7}}
+
{{#set: ec number=EC-3.1.13.1}}
−
{{#set: gene associated=Tiso_gene_13909}}
+
{{#set: gene associated=Tiso_gene_11612|Tiso_gene_11613}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY0-1479}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:22, 21 March 2018

Reaction RXN0-6479

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • exosome_complex_exonuclease
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • n H2O[c] + 1 a tRNA precursor with a 5' extension and a long 3' trailer[c] => n a nucleoside 5'-monophosphate[c] + 1 a tRNA precursor with a 5' extension and a short 3' extension[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1479, tRNA processing: PWY0-1479
    • 4 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-6479&oldid=48172"