Difference between revisions of "RXN-12400"
From metabolic_network
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | + | ||
* common name: | * common name: | ||
| − | ** | + | ** xyloglucan XLLG oligosaccharide β-galactosidase |
| + | ** glycoside_hydrolase | ||
| + | ** polyprotein | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23] | ||
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction | + | == Reaction Formula == |
| − | + | * With identifiers: | |
| − | + | ** 1 [[CPD-13378]][c] '''+''' 2 [[WATER]][c] '''=>''' 2 [[D-galactopyranose]][c] '''+''' 1 [[CPD-13375]][c] | |
| − | + | * With common name(s): | |
| − | * [ | + | ** 1 XLLG xyloglucan oligosaccharide[c] '''+''' 2 H2O[c] '''=>''' 2 D-galactopyranose[c] '''+''' 1 XXXG xyloglucan oligosaccharide[c] |
| − | * [ | + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object= | + | == Genes associated with this reaction == |
| − | * [ | + | Genes have been associated with this reaction based on different elements listed below. |
| + | * Gene: [[Tiso_gene_1398]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_12839]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_17558]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807] | ||
| + | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=xyloglucan XLLG oligosaccharide β-galactosidase}} |
| − | {{#set: common name= | + | {{#set: common name=glycoside_hydrolase}} |
| − | {{#set: | + | {{#set: common name=polyprotein}} |
| − | {{#set: | + | {{#set: ec number=EC-3.2.1.23}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_1398|Tiso_gene_12839|Tiso_gene_17558}} |
| + | {{#set: in pathway=PWY-6807}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:11, 21 March 2018
Contents
Reaction RXN-12400
- direction:
- LEFT-TO-RIGHT
- common name:
- xyloglucan XLLG oligosaccharide β-galactosidase
- glycoside_hydrolase
- polyprotein
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-13378[c] + 2 WATER[c] => 2 D-galactopyranose[c] + 1 CPD-13375[c]
- With common name(s):
- 1 XLLG xyloglucan oligosaccharide[c] + 2 H2O[c] => 2 D-galactopyranose[c] + 1 XXXG xyloglucan oligosaccharide[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_1398
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_12839
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_17558
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-6807, xyloglucan degradation II (exoglucanase): PWY-6807
- 3 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
