Difference between revisions of "GUANINE-DEAMINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** leucopelargonidin and leucocyanidin biosynthesis
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.4.3 EC-3.5.4.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''3''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[DIHYDROKAEMPFEROL-4-REDUCTASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GUANINE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[XANTHINE]][c]
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* [[RXN-600]]
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* With common name(s):
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* [[RXN-7775]]
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** 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 guanine[c] '''=>''' 1 ammonium[c] '''+''' 1 xanthine[c]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-525 RXN-525]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_12280]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-creinhardtii]]
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== Pathways ==
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* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
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** '''4''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-6608]], guanosine nucleotides degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6608 PWY-6608]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
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** '''7''' reactions found over '''24''' reactions in the full pathway
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* [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ARACYC:
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* RHEA:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14665 14665]
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{{#set: taxonomic range=TAX-58024}}
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* LIGAND-RXN:
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{{#set: common name=leucopelargonidin and leucocyanidin biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01676 R01676]
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{{#set: reaction found=3}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction not found=4}}
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{{#set: common name=ORF}}
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{{#set: completion rate=75.0}}
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{{#set: ec number=EC-3.5.4.3}}
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{{#set: gene associated=Tiso_gene_12280}}
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{{#set: in pathway=P164-PWY|PWY-6608|PWY-5497|PWY-6606}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:27, 21 March 2018

Reaction GUANINE-DEAMINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 H+[c] + 1 guanine[c] => 1 ammonium[c] + 1 xanthine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
    • 4 reactions found over 17 reactions in the full pathway
  • PWY-6608, guanosine nucleotides degradation III: PWY-6608
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
    • 7 reactions found over 24 reactions in the full pathway
  • PWY-6606, guanosine nucleotides degradation II: PWY-6606
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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