Difference between revisions of "Tiso gene 1398"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7743 RXN-7743] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Gene == Gene Tiso_gene_1398 == * right end position: ** 21490 * transcription direction: ** POSITIVE * left end position: ** 16012 * centisome position: ** 67.046...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7743 RXN-7743] ==
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== Gene Tiso_gene_1398 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 21490
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1.182 EC-2.3.1.182]
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** POSITIVE
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* left end position:
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** 16012
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* centisome position:
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** 67.04631   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.2.1.23-RXN]]
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** 1 [[ACETYL-COA]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-31]][c] '''+''' 1 [[CO-A]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 acetyl-CoA[c] '''+''' 1 pyruvate[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 (R)-citramalate[c] '''+''' 1 coenzyme A[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[BETAGALACTOSID-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_11453]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[synechocystis]]
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* Reaction: [[KETOLACTOSE-RXN]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
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*** Assignment: ec-number
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** '''5''' reactions found over '''8''' reactions in the full pathway
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** Source: [[orthology-esiliculosus]]
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== Reconstruction information  ==
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* Reaction: [[RXN-12398]]
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* Category: [[orthology]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-synechocystis]]
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*** Assignment: ec-number
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-12399]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-12400]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-6807]]
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* [[BGALACT-PWY]]
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* [[LACTOSEUTIL-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=21490}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19046 19046]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=16012}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07399 R07399]
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{{#set: centisome position=67.04631    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=3.2.1.23-RXN|BETAGALACTOSID-RXN|KETOLACTOSE-RXN|RXN-12398|RXN-12399|RXN-12400}}
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{{#set: ec number=EC-2.3.1.182}}
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{{#set: pathway associated=PWY-6807|BGALACT-PWY|LACTOSEUTIL-PWY}}
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{{#set: gene associated=Tiso_gene_11453}}
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{{#set: in pathway=PWY-5101}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:09, 21 March 2018

Gene Tiso_gene_1398

  • right end position:
    • 21490
  • transcription direction:
    • POSITIVE
  • left end position:
    • 16012
  • centisome position:
    • 67.04631
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1398&oldid=39792"