Difference between revisions of "HISTIDINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7673 RXN-7673] == * direction: ** REVERSIBLE * common name: ** chlorophyll_chloroplastic * ec n...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDINE--TRNA-LIGASE-RXN HISTIDINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7673 RXN-7673] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDINE--TRNA-LIGASE-RXN HISTIDINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** chlorophyll_chloroplastic
+
** histidyl-trna_synthetase_(c-terminal_region)_histidyl-trna_synthetase_(n-terminal_region)
 +
** ORF
 +
** atp-dependent_rna_helicase_dhx30-like
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.62 EC-2.5.1.62]
+
** [http://enzyme.expasy.org/EC/6.1.1.21 EC-6.1.1.21]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[PROTON]][c] '''+''' 1 [[CPD-7014]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''<=>''' 1 [[CPD-7013]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[HIS-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HIS]][c] '''=>''' 1 [[Charged-HIS-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 H+[c] '''+''' 1 chlorophyllide b[c] '''+''' 1 geranylgeranyl diphosphate[c] '''<=>''' 1 geranylgeranyl chlorophyll b[c] '''+''' 1 diphosphate[c]
+
** 1 a tRNAhis[c] '''+''' 1 ATP[c] '''+''' 1 L-histidine[c] '''=>''' 1 an L-histidyl-[tRNAhis][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_19542]]
+
* Gene: [[Tiso_gene_12634]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_8798]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13414]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=chlorophyll_chloroplastic}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17313 17313]
−
{{#set: ec number=EC-2.5.1.62}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Tiso_gene_19542}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03655 R03655]
−
{{#set: in pathway=}}
+
* UNIPROT:
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/Q9X0H5 Q9X0H5]
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
** [http://www.uniprot.org/uniprot/O58028 O58028]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/O67223 O67223]
 +
** [http://www.uniprot.org/uniprot/Q9ZK27 Q9ZK27]
 +
** [http://www.uniprot.org/uniprot/Q9PPF4 Q9PPF4]
 +
** [http://www.uniprot.org/uniprot/P56455 P56455]
 +
** [http://www.uniprot.org/uniprot/Q58406 Q58406]
 +
** [http://www.uniprot.org/uniprot/O32039 O32039]
 +
** [http://www.uniprot.org/uniprot/O51160 O51160]
 +
** [http://www.uniprot.org/uniprot/O66522 O66522]
 +
** [http://www.uniprot.org/uniprot/Q9ZDL9 Q9ZDL9]
 +
** [http://www.uniprot.org/uniprot/Q9JUZ9 Q9JUZ9]
 +
** [http://www.uniprot.org/uniprot/Q9CE78 Q9CE78]
 +
** [http://www.uniprot.org/uniprot/P47281 P47281]
 +
** [http://www.uniprot.org/uniprot/O34459 O34459]
 +
** [http://www.uniprot.org/uniprot/O83647 O83647]
 +
** [http://www.uniprot.org/uniprot/O84547 O84547]
 +
** [http://www.uniprot.org/uniprot/Q9Z7P1 Q9Z7P1]
 +
** [http://www.uniprot.org/uniprot/P43823 P43823]
 +
** [http://www.uniprot.org/uniprot/Q61035 Q61035]
 +
** [http://www.uniprot.org/uniprot/P30053 P30053]
 +
** [http://www.uniprot.org/uniprot/P46696 P46696]
 +
** [http://www.uniprot.org/uniprot/P51348 P51348]
 +
** [http://www.uniprot.org/uniprot/P75069 P75069]
 +
** [http://www.uniprot.org/uniprot/Q55653 Q55653]
 +
** [http://www.uniprot.org/uniprot/Q49027 Q49027]
 +
** [http://www.uniprot.org/uniprot/P07263 P07263]
 +
** [http://www.uniprot.org/uniprot/P60906 P60906]
 +
** [http://www.uniprot.org/uniprot/P12081 P12081]
 +
** [http://www.uniprot.org/uniprot/P93422 P93422]
 +
** [http://www.uniprot.org/uniprot/O82413 O82413]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=histidyl-trna_synthetase_(c-terminal_region)_histidyl-trna_synthetase_(n-terminal_region)}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=atp-dependent_rna_helicase_dhx30-like}}
 +
{{#set: ec number=EC-6.1.1.21}}
 +
{{#set: gene associated=Tiso_gene_12634|Tiso_gene_8798|Tiso_gene_13414}}
 +
{{#set: in pathway=TRNA-CHARGING-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:09, 21 March 2018

Reaction HISTIDINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • histidyl-trna_synthetase_(c-terminal_region)_histidyl-trna_synthetase_(n-terminal_region)
    • ORF
    • atp-dependent_rna_helicase_dhx30-like
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNAhis[c] + 1 ATP[c] + 1 L-histidine[c] => 1 an L-histidyl-[tRNAhis][c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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