Difference between revisions of "RXN1F-66"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ALADEG-PWY ALADEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-66 RXN1F-66] == * direction: ** REVERSIBLE * common name: ** chlorophyll_chloroplastic * ec n...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ALADEG-PWY ALADEG-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-66 RXN1F-66] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** REVERSIBLE
 
* common name:
 
* common name:
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** L-alanine degradation I
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** chlorophyll_chloroplastic
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* ec number:
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** [http://enzyme.expasy.org/EC/2.5.1.62 EC-2.5.1.62]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[ALARACECAT-RXN]]
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** 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CHLOROPHYLL-A]][c] '''+''' 1 [[PPI]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_20278]]
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** 1 chlorophyllide a[c] '''+''' 1 phytyl diphosphate[c] '''+''' 1 H+[c] '''<=>''' 1 chlorophyll a[c] '''+''' 1 diphosphate[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=DALADEHYDROG-RXN DALADEHYDROG-RXN]
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* Gene: [[Tiso_gene_19542]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7764]], chlorophyll a biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7764 PWY-7764]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5086]], chlorophyll a biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5086 PWY-5086]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=ALADEG-PWY ALADEG-PWY]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17317 17317]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: common name=L-alanine degradation I}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06284 R06284]
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{{#set: reaction found=1}}
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{{#set: direction=REVERSIBLE}}
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{{#set: total reaction=2}}
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{{#set: common name=chlorophyll_chloroplastic}}
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{{#set: completion rate=50.0}}
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{{#set: ec number=EC-2.5.1.62}}
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{{#set: gene associated=Tiso_gene_19542}}
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{{#set: in pathway=PWY-5068|PWY-7764|PWY-5086}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:11, 21 March 2018

Reaction RXN1F-66

  • direction:
    • REVERSIBLE
  • common name:
    • chlorophyll_chloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5068, chlorophyll cycle: PWY-5068
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7764, chlorophyll a biosynthesis III: PWY-7764
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5086, chlorophyll a biosynthesis I: PWY-5086
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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