Difference between revisions of "RXN-14903"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATDCD ATDCD] == * direction: ** LEFT-TO-RIGHT * common name: ** ATP:dCDP phosphotransferase * Synon...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903] == * direction: ** LEFT-TO-RIGHT * common name: ** proline_dehydrogenase * ec...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATDCD ATDCD] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ATP:dCDP phosphotransferase
+
** proline_dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.5.5.2 EC-1.5.5.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ATP]][c] '''+''' 1.0 [[DCDP]][c] '''=>''' 1.0 [[DCTP]][c] '''+''' 1.0 [[ADP]][c]
+
** 1 [[ETR-Quinones]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP[c] '''+''' 1.0 dCDP[c] '''=>''' 1.0 dCTP[c] '''+''' 1.0 ADP[c]
+
** 1 an electron-transfer quinone[c] '''+''' 1 L-proline[c] '''=>''' 1 an electron-transfer quinol[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13128]]
+
* Gene: [[Tiso_gene_18826]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_16529]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
* Gene: [[Tiso_gene_18825]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9762]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5737]], (5R)-carbapenem carboxylate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5737 PWY-5737]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01253 R01253]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P95629 P95629]
 +
** [http://www.uniprot.org/uniprot/Q59206 Q59206]
 +
** [http://www.uniprot.org/uniprot/P74275 P74275]
 +
** [http://www.uniprot.org/uniprot/P10503 P10503]
 +
** [http://www.uniprot.org/uniprot/Q51873 Q51873]
 +
** [http://www.uniprot.org/uniprot/Q59426 Q59426]
 +
** [http://www.uniprot.org/uniprot/O24897 O24897]
 +
** [http://www.uniprot.org/uniprot/Q9K0Z9 Q9K0Z9]
 +
** [http://www.uniprot.org/uniprot/Q9JSY1 Q9JSY1]
 +
** [http://www.uniprot.org/uniprot/P09546 P09546]
 +
** [http://www.uniprot.org/uniprot/Q9PMG0 Q9PMG0]
 +
** [http://www.uniprot.org/uniprot/Q9ZN12 Q9ZN12]
 +
** [http://www.uniprot.org/uniprot/Q04499 Q04499]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ATP:dCDP phosphotransferase}}
+
{{#set: common name=proline_dehydrogenase}}
−
{{#set: gene associated=Tiso_gene_13128|Tiso_gene_16529}}
+
{{#set: ec number=EC-1.5.5.2}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Tiso_gene_18826|Tiso_gene_18825|Tiso_gene_9762}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PROUT-PWY|PWY-6922|PWY-5737|CITRULBIO-PWY}}
−
{{#set: reconstruction source=orthology-creinhardtii}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:11, 21 March 2018

Reaction RXN-14903

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • proline_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PROUT-PWY, L-proline degradation: PROUT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6922, L-Nδ-acetylornithine biosynthesis: PWY-6922
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-5737, (5R)-carbapenem carboxylate biosynthesis: PWY-5737
    • 1 reactions found over 6 reactions in the full pathway
  • CITRULBIO-PWY, L-citrulline biosynthesis: CITRULBIO-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14903&oldid=40082"