Difference between revisions of "RXN-17781"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17781 RXN-17781] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17781 RXN-17781] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase)
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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** 3-hydroxyacyl-_dehydrogenase
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** hydroxyacyl-coenzyme_a_mitochondrial
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''13''' reactions in the full pathway
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* With identifiers:
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* [[RXN-16112]]
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** 1 [[NAD]][c] '''+''' 1 [[CPD-19168]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-19167]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_9871]]
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** 1 NAD+[c] '''+''' 1 (S)-3-hydroxy-(7Z)-hexadecenoyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-oxo-(7Z)-hexadecenoyl-CoA[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-17109]]
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* Gene: [[Tiso_gene_18838]]
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** 1 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_9871]]
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*** Assignment: EC-NUMBER
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** 2 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_5857]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* [[RXN-17113]]
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** Source: [[annotation-experimental_annotation]]
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** 1 associated gene(s):
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_18566]]
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* Gene: [[Tiso_gene_18839]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* [[RXN-17115]]
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* Gene: [[Tiso_gene_14262]]
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** 0 associated gene:
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** Source: [[annotation-in-silico_annotation]]
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** 2 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* [[RXN-17116]]
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* Gene: [[Tiso_gene_14026]]
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** 5 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_3856]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_17451]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_10116]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_3855]]
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== Pathways  ==
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*** [[Tiso_gene_15327]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16079 RXN-16079]
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*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16081 RXN-16081]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16113 RXN-16113]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16114 RXN-16114]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17110 RXN-17110]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17111 RXN-17111]
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−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17112 RXN-17112]
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−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17114 RXN-17114]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=(4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase)}}
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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{{#set: reaction found=5}}
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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{{#set: total reaction=13}}
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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{{#set: completion rate=38.0}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: gene associated=Tiso_gene_18838|Tiso_gene_5857|Tiso_gene_18839|Tiso_gene_14262|Tiso_gene_14026}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:33, 21 March 2018

Reaction RXN-17781

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 (S)-3-hydroxy-(7Z)-hexadecenoyl-CoA[c] => 1 H+[c] + 1 NADH[c] + 1 3-oxo-(7Z)-hexadecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17781&oldid=42338"