Difference between revisions of "RXN0-2023"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TA...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2023 RXN0-2023] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2023 RXN0-2023] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://enzyme.expasy.org/EC/2.8.1.13 EC-2.8.1.13]
* common name:
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** L-valine biosynthesis
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* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''4''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
* [[ACETOLACTREDUCTOISOM-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[tRNA-uridine34]][c] '''+''' 1 [[TusE-S-sulfanylcysteine]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[tRNA-2-thiouridine34]][c] '''+''' 1 [[TusE-L-cysteine]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Acceptor]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_10173]]
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** 1 ATP[c] '''+''' 1 a uridine34 in tRNA[c] '''+''' 1 a [TusE sulfur carrier protein]-S-sulfanylcysteine[c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 a 2-thiouridine34 in tRNA[c] '''+''' 1 a [TusE sulfur carrier protein]-L-cysteine[c] '''+''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an oxidized electron acceptor[c]
** 3 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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== Genes associated with this reaction  ==
*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_2786]]
* [[ACETOLACTSYN-RXN]]
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** Source: [[orthology-esiliculosus]]
** 1 associated gene(s):
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== Pathways  ==
*** [[Tiso_gene_11362]]
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== Reconstruction information  ==
** 2 reconstruction source(s) associated:
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* Category: [[orthology]]
*** [[manual-primary_network]]
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** Source: [[orthology-esiliculosus]]
*** [[annotation-experimental_annotation]]
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*** Tool: [[pantograph]]
* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_18403]]
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*** [[Tiso_gene_14984]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[DIHYDROXYISOVALDEHYDRAT-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_1563]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
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{{#set: ec number=EC-2.8.1.13}}
{{#set: taxonomic range=TAX-2157}}
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{{#set: gene associated=Tiso_gene_2786}}
{{#set: taxonomic range=TAX-2}}
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{{#set: in pathway=}}
{{#set: taxonomic range=TAX-2759}}
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{{#set: reconstruction category=orthology}}
{{#set: common name=L-valine biosynthesis}}
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{{#set: reconstruction source=orthology-esiliculosus}}
{{#set: reaction found=4}}
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{{#set: reconstruction tool=pantograph}}
{{#set: total reaction=4}}
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{{#set: completion rate=100.0}}
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Latest revision as of 19:33, 21 March 2018

Reaction RXN0-2023

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links