Difference between revisions of "PWY-7220"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNKIN-RXN PNKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxal_kinase * ec numbe...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNKIN-RXN PNKIN-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** pyridoxal_kinase
+
** adenosine deoxyribonucleotides de novo biosynthesis II
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.7.1.35 EC-2.7.1.35]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''4''' reactions in the full pathway
−
** 1 [[PYRIDOXINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXINE-5P]][c]
+
* [[ADPREDUCT-RXN]]
−
* With common name(s):
+
** 4 associated gene(s):
−
** 1 pyridoxine[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 pyridoxine 5'-phosphate[c]
+
*** [[Tiso_gene_9916]]
−
 
+
*** [[Tiso_gene_10617]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_10138]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_9915]]
−
* [[Tiso_gene_6106]]
+
** 6 reconstruction source(s) associated:
−
** IN-SILICO_ANNOTATION
+
*** [[annotation-experimental_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** [[orthology-esiliculosus]]
−
** [[pantograph]]-[[athaliana]]
+
*** [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[orthology-athaliana]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** [[orthology-synechocystis]]
−
== Pathways  ==
+
*** [[manual-primary_network]]
−
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
+
* [[DADPKIN-RXN]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** 6 associated gene(s):
−
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
+
*** [[Tiso_gene_16529]]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
*** [[Tiso_gene_17272]]
−
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
+
*** [[Tiso_gene_195]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
*** [[Tiso_gene_9290]]
−
== Reconstruction information  ==
+
*** [[Tiso_gene_18224]]
−
* Category: [[orthology]]
+
*** [[Tiso_gene_17271]]
−
** Source: [[orthology-athaliana]]
+
** 6 reconstruction source(s) associated:
−
*** Tool: [[pantograph]]
+
*** [[annotation-experimental_annotation]]
−
** Source: [[orthology-creinhardtii]]
+
*** [[orthology-esiliculosus]]
−
*** Tool: [[pantograph]]
+
*** [[annotation-in-silico_annotation]]
−
** Source: [[orthology-esiliculosus]]
+
*** [[orthology-athaliana]]
−
*** Tool: [[pantograph]]
+
*** [[orthology-synechocystis]]
−
* Category: [[annotation]]
+
*** [[manual-primary_network]]
−
** Source: [[annotation-in-silico_annotation]]
+
* [[RXN0-747]]
−
*** Tool: [[pathwaytools]]
+
** 4 associated gene(s):
 +
*** [[Tiso_gene_9916]]
 +
*** [[Tiso_gene_10138]]
 +
*** [[Tiso_gene_10617]]
 +
*** [[Tiso_gene_9915]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-745 RXN0-745]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ECOCYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25108 25108]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7220 PWY-7220]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01909 R01909]
+
{{#set: common name=adenosine deoxyribonucleotides de novo biosynthesis II}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction found=3}}
−
{{#set: common name=pyridoxal_kinase}}
+
{{#set: total reaction=4}}
−
{{#set: ec number=EC-2.7.1.35}}
+
{{#set: completion rate=75.0}}
−
{{#set: gene associated=Tiso_gene_6106}}
+
−
{{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:41, 21 March 2018

Pathway PWY-7220

  • taxonomic range:
  • common name:
    • adenosine deoxyribonucleotides de novo biosynthesis II
  • Synonym(s):

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7220&oldid=43185"