Difference between revisions of "Tiso gene 1366"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-218 RXN3O-218] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_1366 == * right end position: ** 8852 * transcription direction: ** NEGATIVE * left end position: ** 6843 * centisome position: ** 28.45795...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-218 RXN3O-218] ==
+
== Gene Tiso_gene_1366 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 8852
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20]
+
** NEGATIVE
 +
* left end position:
 +
** 6843
 +
* centisome position:
 +
** 28.457954   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.6.3.50-RXN]]
−
** 2 [[FERROCYTOCHROME-B5]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[EPISTEROL]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[CPD-700]][c] '''+''' 2 [[WATER]][c]
+
** Source: [[orthology-esiliculosus]]
−
* With common name(s):
+
* Reaction: [[ATPASE-RXN]]
−
** 2 a ferrocytochrome b5[c] '''+''' 2 H+[c] '''+''' 1 oxygen[c] '''+''' 1 episterol[c] '''=>''' 2 a ferricytochrome b5[c] '''+''' 1 ergosta-5,7,24(28)-trien-3β-ol[c] '''+''' 2 H2O[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_5446]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
== Pathways  ==
+
−
* [[PWY-6075]], ergosterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6075 PWY-6075]
+
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
+
−
** '''10''' reactions found over '''36''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
−
*** Tool: [[pantograph]]
+
* Reaction: [[ATPSYN-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[TRANS-RXN-249]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways associated ==
 +
* [[PWY-7219]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=8852}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33463 33463]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=6843}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07505 R07505]
+
{{#set: centisome position=28.457954    }}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07491 R07491]
+
{{#set: reaction associated=3.6.3.50-RXN|ATPASE-RXN|ATPSYN-RXN|TRANS-RXN-249}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: pathway associated=PWY-7219}}
−
{{#set: ec number=EC-1.14.19.20}}
+
−
{{#set: gene associated=Tiso_gene_5446}}
+
−
{{#set: in pathway=PWY-6075|PWY-2541}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-athaliana}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 19:41, 21 March 2018

Gene Tiso_gene_1366

  • right end position:
    • 8852
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 6843
  • centisome position:
    • 28.457954
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1366&oldid=43218"