Difference between revisions of "MANNKIN-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNKIN-RXN MANNKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hexokinase * ec number:...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNKIN-RXN MANNKIN-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** flavin biosynthesis III (fungi)
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** hexokinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.7 EC-2.7.1.7]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''6''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[DIOHBUTANONEPSYN-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[D-mannopyranose]][c] '''=>''' 1 [[CPD-15979]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_14275]]
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** 1 ATP[c] '''+''' 1 D-mannopyranose[c] '''=>''' 1 D-mannopyranose 6-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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*** [[Tiso_gene_19932]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_3107]]
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* [[FADSYN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 4 associated gene(s):
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_5393]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_5392]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_7479]]
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_1086]]
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* Gene: [[Tiso_gene_1303]]
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** 4 reconstruction source(s) associated:
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** Source: [[orthology-creinhardtii]]
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*** [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** [[orthology-creinhardtii]]
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* [[PWY-6140]], CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6140 PWY-6140]
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*** [[orthology-synechocystis]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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* [[PWY-3861]], mannitol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3861 PWY-3861]
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* [[GTP-CYCLOHYDRO-II-RXN]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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** 3 associated gene(s):
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* [[PWY-6992]], 1,5-anhydrofructose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6992 PWY-6992]
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*** [[Tiso_gene_14275]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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*** [[Tiso_gene_19932]]
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== Reconstruction information  ==
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*** [[Tiso_gene_8035]]
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* Category: [[orthology]]
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** 4 reconstruction source(s) associated:
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** Source: [[orthology-creinhardtii]]
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*** [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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*** [[annotation-in-silico_annotation]]
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* Category: [[annotation]]
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*** [[orthology-synechocystis]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Tool: [[pathwaytools]]
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* [[RIBOFLAVIN-SYN-RXN]]
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** Source: [[annotation-experimental_annotation]]
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** 1 associated gene(s):
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_13686]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RIBOFLAVINKIN-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_7479]]
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*** [[Tiso_gene_1086]]
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*** [[Tiso_gene_16837]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RXN-10058]]
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** 1 associated gene(s):
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*** [[Tiso_gene_17798]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RIBOPHOSPHAT-RXN RIBOPHOSPHAT-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10057 RXN-10057]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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* RHEA:
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{{#set: common name=flavin biosynthesis III (fungi)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11028 11028]
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{{#set: reaction found=6}}
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* LIGAND-RXN:
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{{#set: total reaction=9}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01326 R01326]
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{{#set: completion rate=67.0}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=hexokinase}}
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{{#set: ec number=EC-2.7.1.7}}
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{{#set: gene associated=Tiso_gene_3107|Tiso_gene_1303}}
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{{#set: in pathway=PWY-6140|PWY-3861|PWY-6992}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:47, 21 March 2018

Reaction MANNKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hexokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 D-mannopyranose[c] => 1 D-mannopyranose 6-phosphate[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6140, CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis: PWY-6140
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-3861, mannitol degradation II: PWY-3861
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6992, 1,5-anhydrofructose degradation: PWY-6992
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=MANNKIN-RXN&oldid=43743"