Difference between revisions of "GALACTUROISOM-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GART-RXN GART-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.1.2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROISOM-RXN GALACTUROISOM-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** bh0493_...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GART-RXN GART-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROISOM-RXN GALACTUROISOM-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* common name:
 +
** ORF
 +
** bh0493_protein
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.2.2 EC-2.1.2.2]
+
** [http://enzyme.expasy.org/EC/5.3.1.12 EC-5.3.1.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''<=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][c]
+
** 1 [[CPD-15633]][c] '''<=>''' 1 [[D-TAGATURONATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 N1-(5-phospho-&beta;-D-ribosyl)glycinamide[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c] '''<=>''' 1 a tetrahydrofolate[c] '''+''' 1 H+[c] '''+''' 1 N2-formyl-N1-(5-phospho-&beta;-D-ribosyl)glycinamide[c]
+
** 1 aldehydo-D-galacturonate[c] '''<=>''' 1 D-tagaturonate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_19097]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_8329]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
+
* [[PWY-7248]], pectin degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7248 PWY-7248]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6613]], tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6613 PWY-6613]
+
* [[GALACTUROCAT-PWY]], D-galacturonate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15053 15053]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27702 27702]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04325 R04325]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01983 R01983]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P21872 P21872]
+
** [http://www.uniprot.org/uniprot/P0A8G3 P0A8G3]
−
** [http://www.uniprot.org/uniprot/P00967 P00967]
+
** [http://www.uniprot.org/uniprot/Q9CF53 Q9CF53]
−
** [http://www.uniprot.org/uniprot/P16340 P16340]
+
−
** [http://www.uniprot.org/uniprot/P22102 P22102]
+
−
** [http://www.uniprot.org/uniprot/Q9PIU2 Q9PIU2]
+
−
** [http://www.uniprot.org/uniprot/Q9JTJ1 Q9JTJ1]
+
−
** [http://www.uniprot.org/uniprot/P43846 P43846]
+
−
** [http://www.uniprot.org/uniprot/Q64737 Q64737]
+
−
** [http://www.uniprot.org/uniprot/Q42805 Q42805]
+
−
** [http://www.uniprot.org/uniprot/Q9UUK7 Q9UUK7]
+
−
** [http://www.uniprot.org/uniprot/P12040 P12040]
+
−
** [http://www.uniprot.org/uniprot/P08179 P08179]
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-2.1.2.2}}
+
{{#set: common name=ORF}}
−
{{#set: in pathway=PWY-6121|PWY-6613}}
+
{{#set: common name=bh0493_protein}}
−
{{#set: reconstruction category=manual|annotation}}
+
{{#set: ec number=EC-5.3.1.12}}
−
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation}}
+
{{#set: gene associated=Tiso_gene_19097|Tiso_gene_8329}}
 +
{{#set: in pathway=PWY-7248|GALACTUROCAT-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:51, 21 March 2018

Reaction GALACTUROISOM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
    • bh0493_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 aldehydo-D-galacturonate[c] <=> 1 D-tagaturonate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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