Difference between revisions of "ALLANTOICASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-395 RXN1G-395] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-eicos-2-enoyl-[acyl-c...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLANTOICASE-RXN ALLANTOICASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** allantoicase...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-395 RXN1G-395] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLANTOICASE-RXN ALLANTOICASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** trans-eicos-2-enoyl-[acyl-carrier protein] reductase (NADPH, B-specific)
+
** allantoicase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.1.9 EC-1.3.1.9]
+
** [http://enzyme.expasy.org/EC/3.5.3.4 EC-3.5.3.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[trans-delta2-arachidoyl-ACPs]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Arachidoyl-ACPs]][c]
+
** 1 [[ALLANTOATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1091]][c] '''+''' 1 [[UREA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 a trans-eicos-2-enoyl-[acp][c] '''=>''' 1 NAD+[c] '''+''' 1 an arachidoyl-[acp][c]
+
** 1 allantoate[c] '''+''' 1 H2O[c] '''=>''' 1 S-ureidoglycolate[c] '''+''' 1 urea[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10778]]
+
* Gene: [[Tiso_gene_15504]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
* [[PWY-5697]], allantoin degradation to ureidoglycolate I (urea producing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5697 PWY-5697]
−
** '''86''' reactions found over '''182''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11016 11016]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02422 R02422]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P18407 P18407]
 +
** [http://www.uniprot.org/uniprot/P25335 P25335]
 +
** [http://www.uniprot.org/uniprot/Q09913 Q09913]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=trans-eicos-2-enoyl-[acyl-carrier protein] reductase (NADPH, B-specific)}}
+
{{#set: common name=allantoicase}}
−
{{#set: ec number=EC-1.3.1.9}}
+
{{#set: ec number=EC-3.5.3.4}}
−
{{#set: gene associated=Tiso_gene_10778}}
+
{{#set: gene associated=Tiso_gene_15504}}
−
{{#set: in pathway=PWYG-321}}
+
{{#set: in pathway=PWY-5697}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:54, 21 March 2018

Reaction ALLANTOICASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • allantoicase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 allantoate[c] + 1 H2O[c] => 1 S-ureidoglycolate[c] + 1 urea[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5697, allantoin degradation to ureidoglycolate I (urea producing): PWY-5697
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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