Difference between revisions of "RME297"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME297 RME297] == * direction: ** REVERSIBLE * common name: ** RME297 * Synonym(s): == Reaction Fo...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME297 RME297] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
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** REVERSIBLE
 
* common name:
 
* common name:
−
** ORF
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** RME297
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** prolyl-trna_synthetase
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−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/6.1.1.15 EC-6.1.1.15]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[PRO-tRNAs]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-PRO-tRNAs]][c]
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** 1.0 [[NADH-P-OR-NOP]][c] '''<=>''' 1.0 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 a tRNApro[c] '''+''' 1 L-proline[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-prolyl-[tRNApro][c]
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** 1.0 NAD(P)H[c] '''<=>''' 1.0 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_11974]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_14791]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 
−
** '''21''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[manual]]
−
** Source: [[orthology-esiliculosus]]
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** Source: [[manual-primary_network]]
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*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
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−
*** Tool: [[pathwaytools]]
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−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14305 14305]
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{{#set: common name=RME297}}
−
* LIGAND-RXN:
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{{#set: in pathway=}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03661 R03661]
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{{#set: reconstruction category=manual}}
−
* UNIPROT:
+
{{#set: reconstruction source=manual-primary_network}}
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** [http://www.uniprot.org/uniprot/O51363 O51363]
+
−
** [http://www.uniprot.org/uniprot/O58734 O58734]
+
−
** [http://www.uniprot.org/uniprot/Q9ZMJ6 Q9ZMJ6]
+
−
** [http://www.uniprot.org/uniprot/P43830 P43830]
+
−
** [http://www.uniprot.org/uniprot/P47525 P47525]
+
−
** [http://www.uniprot.org/uniprot/O26708 O26708]
+
−
** [http://www.uniprot.org/uniprot/Q9JU09 Q9JU09]
+
−
** [http://www.uniprot.org/uniprot/Q58635 Q58635]
+
−
** [http://www.uniprot.org/uniprot/P56124 P56124]
+
−
** [http://www.uniprot.org/uniprot/O83195 O83195]
+
−
** [http://www.uniprot.org/uniprot/Q9Z851 Q9Z851]
+
−
** [http://www.uniprot.org/uniprot/O31755 O31755]
+
−
** [http://www.uniprot.org/uniprot/P36431 P36431]
+
−
** [http://www.uniprot.org/uniprot/Q9ZDE7 Q9ZDE7]
+
−
** [http://www.uniprot.org/uniprot/Q9PHX1 Q9PHX1]
+
−
** [http://www.uniprot.org/uniprot/Q9CDT4 Q9CDT4]
+
−
** [http://www.uniprot.org/uniprot/Q9WYY4 Q9WYY4]
+
−
** [http://www.uniprot.org/uniprot/P75382 P75382]
+
−
** [http://www.uniprot.org/uniprot/Q49090 Q49090]
+
−
** [http://www.uniprot.org/uniprot/P07814 P07814]
+
−
** [http://www.uniprot.org/uniprot/P16659 P16659]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=prolyl-trna_synthetase}}
+
−
{{#set: ec number=EC-6.1.1.15}}
+
−
{{#set: gene associated=Tiso_gene_11974|Tiso_gene_14791}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:54, 21 March 2018

Reaction RME297

  • direction:
    • REVERSIBLE
  • common name:
    • RME297
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 NAD(P)H[c] <=> 1.0 NADH[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RME297&oldid=44560"