Difference between revisions of "PHOSNACMURPENTATRANS-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.2-RXN 3.4.11.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** aminopeptidase_n ** m...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSNACMURPENTATRANS-RXN PHOSNACMURPENTATRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.2-RXN 3.4.11.2-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSNACMURPENTATRANS-RXN PHOSNACMURPENTATRANS-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** aminopeptidase_n
+
** UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase
−
** membrane_aminopeptidase_i
+
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.4.11.2 EC-3.4.11.2]
+
** [http://enzyme.expasy.org/EC/2.7.8.13 EC-2.7.8.13]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[POLYPEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[POLYPEPTIDE]][c] '''+''' 1 [[L-Amino-Acids]][c]
+
** 1 [[CPD-9646]][c] '''+''' 1 [[C1]][c] '''=>''' 1 [[C5]][c] '''+''' 1 [[UMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a polypeptide[c] '''+''' 1 H2O[c] '''=>''' 1 a polypeptide[c] '''+''' 1 an L-amino acid[c]
+
** 1 di-trans,octa-cis-undecaprenyl phosphate[c] '''+''' 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''=>''' 1 undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1 UMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16906]]
+
* Gene: [[Tiso_gene_1604]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_860]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PEPTIDOGLYCANSYN-PWY]], peptidoglycan biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDOGLYCANSYN-PWY PEPTIDOGLYCANSYN-PWY]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 34: Line 33:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28386 28386]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05630 R05630]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P15144 P15144]
+
** [http://www.uniprot.org/uniprot/Q55986 Q55986]
−
** [http://www.uniprot.org/uniprot/P15684 P15684]
+
** [http://www.uniprot.org/uniprot/P45062 P45062]
−
** [http://www.uniprot.org/uniprot/P15145 P15145]
+
** [http://www.uniprot.org/uniprot/Q03521 Q03521]
−
** [http://www.uniprot.org/uniprot/P04825 P04825]
+
** [http://www.uniprot.org/uniprot/O25235 O25235]
−
** [http://www.uniprot.org/uniprot/P45274 P45274]
+
** [http://www.uniprot.org/uniprot/Q9JSZ3 Q9JSZ3]
−
** [http://www.uniprot.org/uniprot/Q9JTU7 Q9JTU7]
+
** [http://www.uniprot.org/uniprot/Q9PI72 Q9PI72]
−
** [http://www.uniprot.org/uniprot/Q10730 Q10730]
+
** [http://www.uniprot.org/uniprot/P37585 P37585]
−
** [http://www.uniprot.org/uniprot/P15541 P15541]
+
** [http://www.uniprot.org/uniprot/P0A6W3 P0A6W3]
−
** [http://www.uniprot.org/uniprot/P37897 P37897]
+
−
** [http://www.uniprot.org/uniprot/P37896 P37896]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=aminopeptidase_n}}
+
{{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase}}
−
{{#set: common name=membrane_aminopeptidase_i}}
+
{{#set: common name=ORF}}
−
{{#set: ec number=EC-3.4.11.2}}
+
{{#set: ec number=EC-2.7.8.13}}
−
{{#set: gene associated=Tiso_gene_16906|Tiso_gene_860}}
+
{{#set: gene associated=Tiso_gene_1604}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PEPTIDOGLYCANSYN-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:55, 21 March 2018

Reaction PHOSNACMURPENTATRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 di-trans,octa-cis-undecaprenyl phosphate[c] + 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] => 1 undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] + 1 UMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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