Difference between revisions of "RXN0-5234"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-12 RXN66-12] == * direction: ** LEFT-TO-RIGHT * common name: ** 4,4-dimethyl-14α-hydrox...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5234 RXN0-5234] == * direction: ** LEFT-TO-RIGHT * common name: ** serine_hydroxymethyltransfe...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5234 RXN0-5234] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** 4 | + | ** serine_hydroxymethyltransferase |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/4.1.2 EC-4.1.2] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[ALLO-THR]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[ACETALD]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 DL-allothreonine[c] '''=>''' 1 glycine[c] '''+''' 1 acetaldehyde[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_7776]] |
| − | ** [[ | + | ** Source: [[annotation-experimental_annotation]] |
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_16153]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_18652]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| − | * Category: [[ | + | * Category: [[annotation]] |
| − | ** Source: [[ | + | ** Source: [[annotation-experimental_annotation]] |
| − | *** Tool: [[ | + | *** Tool: [[pathwaytools]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=serine_hydroxymethyltransferase}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-4.1.2}} |
| − | {{#set: in pathway= | + | {{#set: gene associated=Tiso_gene_7776|Tiso_gene_16153|Tiso_gene_18652}} |
| − | {{#set: reconstruction category= | + | {{#set: in pathway=}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}} |
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:56, 21 March 2018
Contents
Reaction RXN0-5234
- direction:
- LEFT-TO-RIGHT
- common name:
- serine_hydroxymethyltransferase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 DL-allothreonine[c] => 1 glycine[c] + 1 acetaldehyde[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_7776
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Gene: Tiso_gene_16153
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Gene: Tiso_gene_18652
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
