Difference between revisions of "RXNQT-4165"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN] == * direction: ** LEF...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4165 RXNQT-4165] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-isopropylmalate dehydro...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4165 RXNQT-4165] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** 3-isopropylmalate dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.37 EC-2.1.1.37]
+
** [http://enzyme.expasy.org/EC/1.1.1.85 EC-1.1.1.85]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DNA-Cytosines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[5-Methylcytosine-DNA]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[CPDQT-36]][c] '''=>''' 1 [[CPDQT-27]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a cytosine in DNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 a 5-methylcytosine in DNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
** 1 NAD+[c] '''+''' 1 3-(3'-methylthio)propylmalate[c] '''=>''' 1 6-(methylthio)-2-oxohexanoate[c] '''+''' 1 CO2[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9438]]
+
* Gene: [[Tiso_gene_2920]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_5540]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_2359]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_10467]]
+
−
** [[pantograph]]-[[synechocystis]]
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
−
** Source: [[orthology-creinhardtii]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-synechocystis]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00380 R00380]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08625 R08625]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P24581 P24581]
+
−
** [http://www.uniprot.org/uniprot/P05102 P05102]
+
−
** [http://www.uniprot.org/uniprot/P05101 P05101]
+
−
** [http://www.uniprot.org/uniprot/P06530 P06530]
+
−
** [http://www.uniprot.org/uniprot/O41165 O41165]
+
−
** [http://www.uniprot.org/uniprot/Q98580 Q98580]
+
−
** [http://www.uniprot.org/uniprot/Q98567 Q98567]
+
−
** [http://www.uniprot.org/uniprot/Q59606 Q59606]
+
−
** [http://www.uniprot.org/uniprot/P0A462 P0A462]
+
−
** [http://www.uniprot.org/uniprot/P71101 P71101]
+
−
** [http://www.uniprot.org/uniprot/P50192 P50192]
+
−
** [http://www.uniprot.org/uniprot/P50185 P50185]
+
−
** [http://www.uniprot.org/uniprot/Q38652 Q38652]
+
−
** [http://www.uniprot.org/uniprot/P52311 P52311]
+
−
** [http://www.uniprot.org/uniprot/P31974 P31974]
+
−
** [http://www.uniprot.org/uniprot/P30774 P30774]
+
−
** [http://www.uniprot.org/uniprot/P23941 P23941]
+
−
** [http://www.uniprot.org/uniprot/P25262 P25262]
+
−
** [http://www.uniprot.org/uniprot/P25267 P25267]
+
−
** [http://www.uniprot.org/uniprot/P25263 P25263]
+
−
** [http://www.uniprot.org/uniprot/P15446 P15446]
+
−
** [http://www.uniprot.org/uniprot/P24600 P24600]
+
−
** [http://www.uniprot.org/uniprot/P23737 P23737]
+
−
** [http://www.uniprot.org/uniprot/P13906 P13906]
+
−
** [http://www.uniprot.org/uniprot/P14243 P14243]
+
−
** [http://www.uniprot.org/uniprot/P14244 P14244]
+
−
** [http://www.uniprot.org/uniprot/P14230 P14230]
+
−
** [http://www.uniprot.org/uniprot/P11409 P11409]
+
−
** [http://www.uniprot.org/uniprot/P10283 P10283]
+
−
** [http://www.uniprot.org/uniprot/P25265 P25265]
+
−
** [http://www.uniprot.org/uniprot/P0AED9 P0AED9]
+
−
** [http://www.uniprot.org/uniprot/P20589 P20589]
+
−
** [http://www.uniprot.org/uniprot/Q02778 Q02778]
+
−
** [http://www.uniprot.org/uniprot/P95820 P95820]
+
−
** [http://www.uniprot.org/uniprot/P70750 P70750]
+
−
** [http://www.uniprot.org/uniprot/P25264 P25264]
+
−
** [http://www.uniprot.org/uniprot/Q47257 Q47257]
+
−
** [http://www.uniprot.org/uniprot/O87740 O87740]
+
−
** [http://www.uniprot.org/uniprot/P43420 P43420]
+
−
** [http://www.uniprot.org/uniprot/Q9JWD8 Q9JWD8]
+
−
** [http://www.uniprot.org/uniprot/Q9JU80 Q9JU80]
+
−
** [http://www.uniprot.org/uniprot/P08455 P08455]
+
−
** [http://www.uniprot.org/uniprot/P11408 P11408]
+
−
** [http://www.uniprot.org/uniprot/P17044 P17044]
+
−
** [http://www.uniprot.org/uniprot/P19888 P19888]
+
−
** [http://www.uniprot.org/uniprot/P00476 P00476]
+
−
** [http://www.uniprot.org/uniprot/P09915 P09915]
+
−
** [http://www.uniprot.org/uniprot/P68586 P68586]
+
−
** [http://www.uniprot.org/uniprot/Q9ZLZ0 Q9ZLZ0]
+
−
** [http://www.uniprot.org/uniprot/O24892 O24892]
+
−
** [http://www.uniprot.org/uniprot/P45000 P45000]
+
−
** [http://www.uniprot.org/uniprot/P29567 P29567]
+
−
** [http://www.uniprot.org/uniprot/P25282 P25282]
+
−
** [http://www.uniprot.org/uniprot/Q9JQR8 Q9JQR8]
+
−
** [http://www.uniprot.org/uniprot/O25746 O25746]
+
−
** [http://www.uniprot.org/uniprot/P36216 P36216]
+
−
** [http://www.uniprot.org/uniprot/P25283 P25283]
+
−
** [http://www.uniprot.org/uniprot/O23273 O23273]
+
−
** [http://www.uniprot.org/uniprot/Q92072 Q92072]
+
−
** [http://www.uniprot.org/uniprot/P79922 P79922]
+
−
** [http://www.uniprot.org/uniprot/O08431 O08431]
+
−
** [http://www.uniprot.org/uniprot/Q9Z330 Q9Z330]
+
−
** [http://www.uniprot.org/uniprot/P13864 P13864]
+
−
** [http://www.uniprot.org/uniprot/Q9S9I8 Q9S9I8]
+
−
** [http://www.uniprot.org/uniprot/P34881 P34881]
+
−
** [http://www.uniprot.org/uniprot/Q60171 Q60171]
+
−
** [http://www.uniprot.org/uniprot/O65343 O65343]
+
−
** [http://www.uniprot.org/uniprot/O49022 O49022]
+
−
** [http://www.uniprot.org/uniprot/Q9T0I1 Q9T0I1]
+
−
** [http://www.uniprot.org/uniprot/O49889 O49889]
+
−
** [http://www.uniprot.org/uniprot/O42731 O42731]
+
−
** [http://www.uniprot.org/uniprot/O48866 O48866]
+
−
** [http://www.uniprot.org/uniprot/O48867 O48867]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.1.1.37}}
+
{{#set: common name=3-isopropylmalate dehydrogenase}}
−
{{#set: gene associated=Tiso_gene_9438|Tiso_gene_5540|Tiso_gene_2359|Tiso_gene_10467}}
+
{{#set: ec number=EC-1.1.1.85}}
 +
{{#set: gene associated=Tiso_gene_2920}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-experimental_annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:57, 21 March 2018

Reaction RXNQT-4165

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-isopropylmalate dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 3-(3'-methylthio)propylmalate[c] => 1 6-(methylthio)-2-oxohexanoate[c] + 1 CO2[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXNQT-4165&oldid=44811"