Difference between revisions of "RXN0-1401"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_12201 == * left end position: ** 4780 * transcription direction: ** POSITIVE * right end position: ** 7218 * centisome position: ** 66.1683...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1401 RXN0-1401] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phosphorylase * e...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_12201 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1401 RXN0-1401] ==
−
* left end position:
+
* direction:
−
** 4780
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** thymidine_phosphorylase
−
* right end position:
+
* ec number:
−
** 7218
+
** [http://enzyme.expasy.org/EC/2.7.4.23 EC-2.7.4.23]
−
* centisome position:
+
−
** 66.16833   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[HOLO-ACP-SYNTH-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[RIBOSE-15-BISPHOSPHATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PRPP]][c] '''+''' 1 [[ADP]][c]
−
***automated-name-match
+
* With common name(s):
−
** [[pantograph]]-[[esiliculosus]]
+
** 1 α-D-ribose 1,5-bisphosphate[c] '''+''' 1 ATP[c] '''=>''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 ADP[c]
−
== Pathways associated ==
+
 
−
* [[PWY-6012-1]]
+
== Genes associated with this reaction  ==
−
* [[PWY-6012]]
+
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_1011]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-7805]], aminomethylphosphonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7805 PWY-7805]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY0-661]], PRPP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-661 PWY0-661]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7807]], glyphosate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7807 PWY-7807]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=4780}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20109 20109]
−
{{#set: right end position=7218}}
+
* LIGAND-RXN:
−
{{#set: centisome position=66.16833    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R06836 R06836]
−
{{#set: reaction associated=HOLO-ACP-SYNTH-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: pathway associated=PWY-6012-1|PWY-6012}}
+
{{#set: common name=thymidine_phosphorylase}}
 +
{{#set: ec number=EC-2.7.4.23}}
 +
{{#set: gene associated=Tiso_gene_1011}}
 +
{{#set: in pathway=PWY-7805|PWY0-661|PWY-7807}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:03, 21 March 2018

Reaction RXN0-1401

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thymidine_phosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-ribose 1,5-bisphosphate[c] + 1 ATP[c] => 1 5-phospho-α-D-ribose 1-diphosphate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7805, aminomethylphosphonate degradation: PWY-7805
    • 2 reactions found over 8 reactions in the full pathway
  • PWY0-661, PRPP biosynthesis II: PWY0-661
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7807, glyphosate degradation III: PWY-7807
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-1401&oldid=45506"