Difference between revisions of "RXN-12872"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTURIDYLYLTRANS-RXN GALACTURIDYLYLTRANS-RXN] == * direction: ** REVERSIBLE * ec number: ** [htt...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12872 RXN-12872] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTURIDYLYLTRANS-RXN GALACTURIDYLYLTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12872 RXN-12872] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.7.7.12 EC-2.7.7.12]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GALACTOSE-1P]][c] '''+''' 1 [[CPD-12575]][c] '''<=>''' 1 [[GLC-1-P]][c] '''+''' 1 [[CPD-14553]][c]
+
** 1 [[CPD-13914]][c] '''=>''' 1 [[CPD-13910]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 &alpha;-D-galactose 1-phosphate[c] '''+''' 1 UDP-&alpha;-D-glucose[c] '''<=>''' 1 &alpha;-D-glucopyranose 1-phosphate[c] '''+''' 1 UDP-&alpha;-D-galactose[c]
+
** 1 cyclic-2,3-O-oxalyl-L-threonate[c] '''=>''' 1 cyclic- 3,4-O-oxalyl-L-threonate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_2435]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
+
* [[PWY-6960]], L-ascorbate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6960 PWY-6960]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13989 13989]
+
{{#set: in pathway=PWY-6960}}
−
* LIGAND-RXN:
+
{{#set: reconstruction category=annotation}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00955 R00955]
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
* UNIPROT:
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P43424 P43424]
+
−
** [http://www.uniprot.org/uniprot/P31764 P31764]
+
−
** [http://www.uniprot.org/uniprot/P07902 P07902]
+
−
** [http://www.uniprot.org/uniprot/P08431 P08431]
+
−
** [http://www.uniprot.org/uniprot/P09148 P09148]
+
−
** [http://www.uniprot.org/uniprot/P13212 P13212]
+
−
** [http://www.uniprot.org/uniprot/P09580 P09580]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: ec number=EC-2.7.7.12}}
+
−
{{#set: gene associated=Tiso_gene_2435}}
+
−
{{#set: in pathway=PWY-6317|PWY66-422|PWY-6527}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:04, 21 March 2018

Reaction RXN-12872

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 cyclic-2,3-O-oxalyl-L-threonate[c] => 1 cyclic- 3,4-O-oxalyl-L-threonate[c]

Genes associated with this reaction

Pathways

  • PWY-6960, L-ascorbate degradation III: PWY-6960
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12872&oldid=45651"