Difference between revisions of "Tiso gene 13548"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14275 RXN-14275] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_13548 == * right end position: ** 6153 * transcription direction: ** POSITIVE * left end position: ** 4443 * centisome position: ** 71.3162...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14275 RXN-14275] ==
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== Gene Tiso_gene_13548 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6153
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.1.1.M19 EC-1.1.1.M19]
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** POSITIVE
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* left end position:
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** 4443
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* centisome position:
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** 71.316216   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.4.2.31-RXN]]
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** 1 [[CPD-14916]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD0-2106]][c] '''+''' 1 [[NADH]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 (R)-3-hydroxyoctanoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 3-oxooctanoyl-CoA[c] '''+''' 1 NADH[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14027]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5857]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14026]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=6153}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31196 31196]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=4443}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04745 R04745]
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{{#set: centisome position=71.316216    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=2.4.2.31-RXN}}
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{{#set: ec number=EC-1.1.1.M19}}
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{{#set: gene associated=Tiso_gene_14027|Tiso_gene_5857|Tiso_gene_14026}}
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{{#set: in pathway=PWY-6920}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:06, 21 March 2018

Gene Tiso_gene_13548

  • right end position:
    • 6153
  • transcription direction:
    • POSITIVE
  • left end position:
    • 4443
  • centisome position:
    • 71.316216
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13548&oldid=45946"